DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg2

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_033069.1 Gene:Reg2 / 19693 MGIID:97896 Length:173 Species:Mus musculus


Alignment Length:130 Identity:35/130 - (26%)
Similarity:56/130 - (43%) Gaps:13/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 GEKRYYLGIFFKANWFKATQYCR-YHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLAD 309
            |...||| |..:..|.:|..:|: .:..||.||.||.|::.:...:::.|....:.|....|...
Mouse    51 GSYCYYL-IEDRLTWGEADLFCQNMNAGHLVSILSQAESNFVASLVKESGTTASNVWTGLHDPKS 114

  Fly   310 EGNFFWMATGRPITFTNWNAGEPN--NFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            ...:.| ::|....|.:|..|.|:  |..|       |:.|.:.... .||.|..|..:..|||:
Mouse   115 NRRWHW-SSGSLFLFKSWATGAPSTANRGY-------CVSLTSNTAY-KKWKDENCEAQYSFVCK 170

  Fly   373  372
            Mouse   171  170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 34/127 (27%)
Reg2NP_033069.1 CLECT 43..171 CDD:295302 35/130 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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