DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg1

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_033068.1 Gene:Reg1 / 19692 MGIID:97895 Length:165 Species:Mus musculus


Alignment Length:164 Identity:38/164 - (23%)
Similarity:64/164 - (39%) Gaps:25/164 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PSE-NEVDNDCP----NCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCR-YHGMH 273
            ||: .|.:.|.|    :|.:.|    |.::.......|.|        ..|..|..:|: .:..:
Mouse    18 PSQGQEAEEDLPSARISCPEGS----NAYSSYCYYFTEDR--------LTWADADLFCQNMNSGY 70

  Fly   274 LASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYE 338
            |.|:.||.|.:.:...|::.|....:.|....|......:.| ::|....:.:|..|.||     
Mouse    71 LVSVLSQAEGNFVASLIKESGTTDANVWTGLHDPKRNRRWHW-SSGSLFLYKSWATGSPN----- 129

  Fly   339 NGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            :.....|:.|.:..|. .||.|..|..:..|||:
Mouse   130 SSNRGYCVSLTSNTGY-KKWKDDNCDAQYSFVCK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 29/125 (23%)
Reg1NP_033068.1 CLECT 35..163 CDD:295302 33/147 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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