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Protein Alignment tfc and Reg1
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033068.1 |
Gene: | Reg1 / 19692 |
MGIID: | 97895 |
Length: | 165 |
Species: | Mus musculus |
Alignment Length: | 164 |
Identity: | 38/164 - (23%) |
Similarity: | 64/164 - (39%) |
Gaps: | 25/164 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 215 PSE-NEVDNDCP----NCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCR-YHGMH 273
||: .|.:.|.| :|.:.| |.::.......|.| ..|..|..:|: .:..:
Mouse 18 PSQGQEAEEDLPSARISCPEGS----NAYSSYCYYFTEDR--------LTWADADLFCQNMNSGY 70
Fly 274 LASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYE 338
|.|:.||.|.:.:...|::.|....:.|....|......:.| ::|....:.:|..|.||
Mouse 71 LVSVLSQAEGNFVASLIKESGTTDANVWTGLHDPKRNRRWHW-SSGSLFLYKSWATGSPN----- 129
Fly 339 NGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
:.....|:.|.:..|. .||.|..|..:..|||:
Mouse 130 SSNRGYCVSLTSNTGY-KKWKDDNCDAQYSFVCK 162
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
29/125 (23%) |
Reg1 | NP_033068.1 |
CLECT |
35..163 |
CDD:295302 |
33/147 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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