DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-238

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_507286.3 Gene:clec-238 / 190841 WormBaseID:WBGene00013622 Length:222 Species:Caenorhabditis elegans


Alignment Length:183 Identity:47/183 - (25%)
Similarity:64/183 - (34%) Gaps:64/183 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 CPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEK 288
            ||...::.:.....|.:        |.::|...::|   |...|...|..::.|.:|||      
 Worm    72 CPTDWEQFERPSGTWCI--------RVFVGSGPRSN---ADSMCSVQGAVVSGIQNQEE------ 119

  Fly   289 HIRDFGLGHEHFWIS----------------------GTDLA--DEGNFFWMATGRPITFTN--- 326
              .||.:|.   |||                      |...|  ...:|.|  |....|.|:   
 Worm   120 --IDFIVGS---WISMYGSTGSMWVGAQRTAACWTLQGQTAACSKTTSFEW--TDNSATGTDGYV 177

  Fly   327 WN-AGEPNNFRYENGEEENCLEL-WNRDGKGLKWNDSPCSFETY--FVCEVQP 375
            || |.||||.    |..|.||.| |.    || .:|..|:...|  :||...|
 Worm   178 WNSAVEPNNV----GGMEQCLVLTWT----GL-MSDQTCARTDYVGYVCGKAP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 43/154 (28%)
clec-238NP_507286.3 CLECT 72..217 CDD:214480 44/177 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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