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Protein Alignment tfc and clec-238
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_507286.3 |
Gene: | clec-238 / 190841 |
WormBaseID: | WBGene00013622 |
Length: | 222 |
Species: | Caenorhabditis elegans |
Alignment Length: | 183 |
Identity: | 47/183 - (25%) |
Similarity: | 64/183 - (34%) |
Gaps: | 64/183 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 224 CPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEK 288
||...::.:.....|.: |.::|...::| |...|...|..::.|.:|||
Worm 72 CPTDWEQFERPSGTWCI--------RVFVGSGPRSN---ADSMCSVQGAVVSGIQNQEE------ 119
Fly 289 HIRDFGLGHEHFWIS----------------------GTDLA--DEGNFFWMATGRPITFTN--- 326
.||.:|. ||| |...| ...:|.| |....|.|:
Worm 120 --IDFIVGS---WISMYGSTGSMWVGAQRTAACWTLQGQTAACSKTTSFEW--TDNSATGTDGYV 177
Fly 327 WN-AGEPNNFRYENGEEENCLEL-WNRDGKGLKWNDSPCSFETY--FVCEVQP 375
|| |.||||. |..|.||.| |. || .:|..|:...| :||...|
Worm 178 WNSAVEPNNV----GGMEQCLVLTWT----GL-MSDQTCARTDYVGYVCGKAP 221
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
43/154 (28%) |
clec-238 | NP_507286.3 |
CLECT |
72..217 |
CDD:214480 |
44/177 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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