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Protein Alignment tfc and clec-111
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001355369.1 |
Gene: | clec-111 / 190575 |
WormBaseID: | WBGene00013502 |
Length: | 287 |
Species: | Caenorhabditis elegans |
Alignment Length: | 148 |
Identity: | 29/148 - (19%) |
Similarity: | 50/148 - (33%) |
Gaps: | 43/148 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 263 ATQYCRYHGMHLASISSQEEND----------RLEKHIRDFGLGHEHFWISG------------T 305
|||....:|..|:.:.:..|.| .|:.:...:|: ||:| .
Worm 149 ATQCKSLYGGVLSGLQTLAERDFVAATAQPWLGLQSNFTTYGV-----WINGARKTSCMETVKSV 208
Fly 306 DLADEGNFFWMATGRPITFT----NWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFE 366
|......| |...|:... .|.|.:|:...|. ....|||.|:..:...|..:|..|:..
Worm 209 DCNGTNEF---AYSDPLLTAYDGYTWAANQPSGVDYV-PSSSNCLNLYFTETTILGIDDYMCNVA 269
Fly 367 TY--------FVCEVQPN 376
:. :.|.::|:
Worm 270 SLRGELCYKGYACGIEPS 287
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
28/143 (20%) |
clec-111 | NP_001355369.1 |
PAN_3 |
1..72 |
CDD:336982 |
|
CLECT |
132..267 |
CDD:153057 |
26/126 (21%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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