DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Y38H6C.8

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_507951.1 Gene:Y38H6C.8 / 189689 WormBaseID:WBGene00012621 Length:158 Species:Caenorhabditis elegans


Alignment Length:160 Identity:40/160 - (25%)
Similarity:64/160 - (40%) Gaps:38/160 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PNCV------DESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYC-RYHGMHLASISSQEE 282
            |:||      .:|.|:.|:             ..|.|..||     ..| :..|..|..|::..:
 Worm    16 PDCVPGDVGFGDSCYSFNR-------------VHGKFKDAN-----DLCVKMFGGSLVKITNIID 62

  Fly   283 NDRLEK-HIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCL 346
            |:.::| .:......:..|||..:|.|...|:.|: .|.|:.|:||..|:|.       |:.:|.
 Worm    63 NNWMQKLAVNHLDADYNSFWIGASDAAHYTNWTWI-DGSPMRFSNWGPGQPL-------EDRHCG 119

  Fly   347 ELWNRDGKGLKWNDSPCSFETYFVCEVQPN 376
            .:....|   ||....|.....|:|: .||
 Worm   120 TMLISTG---KWFSQVCDERIQFLCQ-YPN 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 32/125 (26%)
Y38H6C.8NP_507951.1 CLECT 18..142 CDD:214480 36/152 (24%)

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