DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-108

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_493289.1 Gene:clec-108 / 189547 WormBaseID:WBGene00012504 Length:190 Species:Caenorhabditis elegans


Alignment Length:162 Identity:38/162 - (23%)
Similarity:60/162 - (37%) Gaps:41/162 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PNCVDESQYTPNK----WTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDR 285
            |.| |...||..:    |   .|::|....|..        .|||..:|.|: ::.:.:..|.|.
 Worm    25 PKC-DAGWYTSYRPQGIW---CLRVGGSLMYKE--------AATQCAQYGGV-ISGVQNDFERDL 76

  Fly   286 L----EKHIRDFGLGHEHFWISGTDLADEGNFFW---MATGRPITFTNWNAGEPNNFRYENGEEE 343
            |    ::.:..:.:.....|: |......| |:|   ..|| ...|| :..|:|:|...:....:
 Worm    77 LVREAQRQLAGYKVPMSGMWL-GAQRNGSG-FYWTDGFTTG-TAGFT-YGPGQPDNMNIDARVPQ 137

  Fly   344 NCLEL----------WNRDGKGL---KWNDSP 362
            .||.|          |.|...|.   .|.:||
 Worm   138 TCLILITMAPSYTGVWTRFKNGELDDTWCNSP 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 30/134 (22%)
clec-108NP_493289.1 CLECT 41..181 CDD:153057 33/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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