DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-144

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_496528.2 Gene:clec-144 / 188994 WormBaseID:WBGene00012086 Length:181 Species:Caenorhabditis elegans


Alignment Length:141 Identity:31/141 - (21%)
Similarity:56/141 - (39%) Gaps:34/141 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 CPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEK 288
            ||...::.:.....|.:.|        ::|::.:.|..:|:..|...|..|:.:.:|.|.:.:.:
 Worm    46 CPTDWEKFERPSGPWCVKL--------FVGLYLQGNRNEASARCAAEGAVLSGVQNQAELNAMTR 102

  Fly   289 HIRDFGLGHEHFWISG---------------TDLADEGNFFWMATGRPITFTN---WNAGEPNNF 335
            .......|  :||:..               |.|   .:|.|  |....|.|:   |..|:|||:
 Worm   103 QFTKLRYG--YFWVGAMRKTSCLMSQLTATCTAL---NSFEW--TDGSTTGTDGFIWKTGDPNNY 160

  Fly   336 RYENGEEENCL 346
            .| |..:|.|:
 Worm   161 LY-NLYDEPCV 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 27/116 (23%)
clec-144NP_496528.2 CLECT 46..175 CDD:214480 31/141 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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