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Protein Alignment tfc and clec-38
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_507233.2 |
Gene: | clec-38 / 188900 |
WormBaseID: | WBGene00012025 |
Length: | 382 |
Species: | Caenorhabditis elegans |
Alignment Length: | 165 |
Identity: | 38/165 - (23%) |
Similarity: | 57/165 - (34%) |
Gaps: | 48/165 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 213 RDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASI 277
||| || :|..| |..|:.........:|.::|...|..|.||
Worm 256 RDP-------DC-------KYNYN-----------KNCYIRFDITLTIPQAQRFCNEKGADLVSI 295
Fly 278 SSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEE 342
.|..|| |....|.|. |....:.| ||...:|.....|.|.|::|. .:.|:.
Worm 296 HSANEN-RFILTIYDI---HGQILLGG--LAPAVDFIVWLDGSPTTYSNL------LYFYDT--- 345
Fly 343 ENCLEL-----WNRDGKGLKWNDSPCSFETYFVCE 372
.:|:.: ...|| .|....|:.:.:|:|:
Worm 346 RSCVLMTVARGGPYDG---DWYTMNCNVQEFFLCK 377
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
30/129 (23%) |
clec-38 | NP_507233.2 |
CLECT |
122..250 |
CDD:214480 |
|
CLECT |
264..377 |
CDD:214480 |
31/141 (22%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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