DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-38

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_507233.2 Gene:clec-38 / 188900 WormBaseID:WBGene00012025 Length:382 Species:Caenorhabditis elegans


Alignment Length:165 Identity:38/165 - (23%)
Similarity:57/165 - (34%) Gaps:48/165 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 RDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASI 277
            |||       ||       :|..|           |..|:.........:|.::|...|..|.||
 Worm   256 RDP-------DC-------KYNYN-----------KNCYIRFDITLTIPQAQRFCNEKGADLVSI 295

  Fly   278 SSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEE 342
            .|..|| |....|.|.   |....:.|  ||...:|.....|.|.|::|.      .:.|:.   
 Worm   296 HSANEN-RFILTIYDI---HGQILLGG--LAPAVDFIVWLDGSPTTYSNL------LYFYDT--- 345

  Fly   343 ENCLEL-----WNRDGKGLKWNDSPCSFETYFVCE 372
            .:|:.:     ...||   .|....|:.:.:|:|:
 Worm   346 RSCVLMTVARGGPYDG---DWYTMNCNVQEFFLCK 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 30/129 (23%)
clec-38NP_507233.2 CLECT 122..250 CDD:214480
CLECT 264..377 CDD:214480 31/141 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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