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Protein Alignment tfc and clec-24
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001256729.2 |
Gene: | clec-24 / 186004 |
WormBaseID: | WBGene00009856 |
Length: | 396 |
Species: | Caenorhabditis elegans |
Alignment Length: | 153 |
Identity: | 42/153 - (27%) |
Similarity: | 59/153 - (38%) |
Gaps: | 38/153 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 221 DNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDR 285
||.|....|...||| |..:...: :|..:|...|.:|.||.|..|| |
Worm 275 DNTCEYNYDNYCYTP---------------YFELKLSS---EAQTFCASSGSNLVSIHSANEN-R 320
Fly 286 LEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWN 350
...:|...|.... |.|...:|: :..|. .|.|..|||. .:.||| |||.|:|
Worm 321 FVYNIIPPGTETS---IGGVAYSDD-SLLWY-DGTPPLFTNM-------IQLENG---NCLFLYN 370
Fly 351 RDGKGLKWNDSPC-SFETYFVCE 372
..:.|..:.| :.:.:|||:
Worm 371 ---DYVHWFGNNCLTTKCHFVCK 390
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
35/125 (28%) |
clec-24 | NP_001256729.2 |
CLECT |
140..268 |
CDD:214480 |
|
CLECT |
282..390 |
CDD:214480 |
38/144 (26%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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