DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-31

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_507258.2 Gene:clec-31 / 186002 WormBaseID:WBGene00009854 Length:368 Species:Caenorhabditis elegans


Alignment Length:111 Identity:25/111 - (22%)
Similarity:46/111 - (41%) Gaps:20/111 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 YHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFF--W----MATGRPITFTNW 327
            |.|..|.||.:::||:.:...:.:..:  |:.|   |.|..:.|..  |    .:|...:.:||:
 Worm   141 YGGSTLVSIKNEQENNAILNFVPNSAV--ENLW---TGLHCKANTTCNWDLESRSTDTNLVYTNF 200

  Fly   328 NAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCEV 373
            .:|..:|         .|:.......:..||....|:....|:||:
 Worm   201 ASGLSSN---------ECVYFITAGSEAGKWKSDSCNQTMSFICEL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 24/109 (22%)
clec-31NP_507258.2 CLECT 110..236 CDD:214480 23/108 (21%)
CLECT 248..361 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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