DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-148

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_497168.1 Gene:clec-148 / 185558 WormBaseID:WBGene00018246 Length:188 Species:Caenorhabditis elegans


Alignment Length:188 Identity:43/188 - (22%)
Similarity:63/188 - (33%) Gaps:60/188 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQY-----------------CRYHGM 272
            |:..:||.|..:.....:.:|   .|..|......||..|.:                 ||..|.
 Worm    22 PSFFNESAYETSGHKPEIYQL---EYSGGCISGYTWFSYTNFCYKSTARAANFNDAHNACRSEGS 83

  Fly   273 HLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFF----------WMAT-GRPITFTN 326
            .||||.|..||..|.:           ...:|..:..:.|:.          |..| |..:.:.|
 Worm    84 ELASIHSLTENQFLVQ-----------LSAAGNRVNSKTNYVMIGLIFENREWSWTDGSSVNYLN 137

  Fly   327 WNAGEPNNFRYENGEEENCLELWN------RDGKG---LKWNDSPCSFETYFVCEVQP 375
            |.||||||.::         |||.      ...||   ..||:.....:..::|:..|
 Worm   138 WAAGEPNNMKH---------ELWTALVSDVNPKKGQMYTHWNNVNMDRQRAYICKRAP 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/160 (23%)
clec-148NP_497168.1 CLECT 60..184 CDD:153057 32/143 (22%)

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