DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-198

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_503091.3 Gene:clec-198 / 183598 WormBaseID:WBGene00008203 Length:499 Species:Caenorhabditis elegans


Alignment Length:156 Identity:34/156 - (21%)
Similarity:52/156 - (33%) Gaps:57/156 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 DNDCPNCVDESQYTP--NKWTMPLLKLGEKRYYLGIFFK-----ANWFKATQYC---RYHGMHLA 275
            |....|.|.....||  :.||        |....|:.:|     ..|:.|..:|   || |.||.
 Worm    70 DESSSNLVLMDSTTPCDSGWT--------KSTVNGMCYKIATADTTWYAAEDWCYSQRY-GSHLT 125

  Fly   276 SISSQEENDRLEKHIRDFGLGHEHFWISGTDLA-----------------DEGNFFWMATGRPIT 323
            |:.|:.|..                ||:.|.::                 |...:.| ..|.|:.
 Worm   126 SVHSEAEAQ----------------WIAATYVSTGWFPYMDNWLGLRRSCDNSTYIW-TDGTPVD 173

  Fly   324 FTNWNAGEPNNFRYENGEEENCLELW 349
            :..|..|.|.:    ...|::|:.:|
 Worm   174 YLWWQPGYPGS----GDPEKSCVTIW 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 26/126 (21%)
clec-198NP_503091.3 CLECT 85..198 CDD:214480 29/141 (21%)
CLECT 371..497 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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