DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-202

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_503095.2 Gene:clec-202 / 183067 WormBaseID:WBGene00007822 Length:476 Species:Caenorhabditis elegans


Alignment Length:247 Identity:57/247 - (23%)
Similarity:94/247 - (38%) Gaps:70/247 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 ADDQERDQQPL-ANQEDFDYDVQESLQSVESEQHDQYYGNI-------FHRDPSENEVDNDCPNC 227
            :|::.|.:|.: ||      .|:::.:::.:.:.|::..|.       |||..|.       |:.
 Worm    21 SDEETRGRQAMVAN------FVKDNQKTIRNGKGDKWMSNFLKTQNLTFHRSLSS-------PSA 72

  Fly   228 VDESQYTPNKWTMPLLKL----------GEKRYYL-GIFFK-----ANWFKATQYC--RYHGMHL 274
            :.:|.      :..|:.|          |..||.| |:.::     .||::...||  ...|.|.
 Worm    73 MSDSS------SQNLVVLADVGTAACASGWTRYDLTGMCYQQSKKTMNWYQGEDYCWNLRPGAHS 131

  Fly   275 ASISSQEENDRLEKHIRDFGLGHE-HFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYE 338
            ||:.||||...|....||...|.: ..||......|...:.| ..|.|.....|....|.:    
 Worm   132 ASVHSQEEAKWLNSLYRDKKNGGQMDSWIGLRRDCDNVTYIW-TDGSPTDCLWWQPDYPKS---- 191

  Fly   339 NGEEENCLELWNRDGKGLKW-NDSP------------CSFE-TYFVCEVQPN 376
            ...|.:|:.:|..|     | .|:|            ||.: :..:|:..||
 Worm   192 EFAEFSCVTIWETD-----WLYDNPAYIPGQYDDMKECSDDGSNVICKYDPN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/146 (26%)
clec-202NP_503095.2 CLECT 92..210 CDD:214480 34/127 (27%)
CLECT 360..472 CDD:470576
Blue background indicates that the domain is not in the aligned region.

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