DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and clec-225

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001021349.2 Gene:clec-225 / 181942 WormBaseID:WBGene00007152 Length:155 Species:Caenorhabditis elegans


Alignment Length:117 Identity:27/117 - (23%)
Similarity:46/117 - (39%) Gaps:16/117 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 KATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGT-DLADEGNFFWMATGRPITFT 325
            ||...|:....||..|.:..:|..:..:..:.   ....||..| .:::|........|..::::
 Worm    48 KAETTCKDMNAHLIFIQTAIDNTAVLNYASNI---TSPMWIGATCKVSEEPTKCMWDDGSYLSYS 109

  Fly   326 NWNAGEP-NNFRYENGEEENC--LELWNRDGKGLKWNDSPCSFETYF-VCEV 373
            |:..|.| .|.       ..|  |:..|:..|| :|..:.|....|. :|||
 Worm   110 NFLPGYPVTNI-------GTCVYLDSPNQPLKG-RWISATCDLAEYHAICEV 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 25/115 (22%)
clec-225NP_001021349.2 CLECT 25..152 CDD:214480 24/114 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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