DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and C49C3.11

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_503089.2 Gene:C49C3.11 / 178520 WormBaseID:WBGene00008201 Length:240 Species:Caenorhabditis elegans


Alignment Length:183 Identity:39/183 - (21%)
Similarity:53/183 - (28%) Gaps:73/183 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGE---KRYYLGIFFKAN--WFKATQYC 267
            ||.|..|....|....||               |..|..|   ||.:...:|..|  :.:|.:.|
 Worm    19 GNPFGGDDKCEEGKPTCP---------------PGYKFQEREGKRGWCLKYFPGNTTFEEAEKIC 68

  Fly   268 RYHGMHLASISSQEENDRL------------EKHIRDFGLGHEHFWISG---------------- 304
            |..|.  ||:|..|....|            |:.|:..|:     |:..                
 Worm    69 RCQGG--ASLSGIENMKELTWVIVQAKASFAEEGIQTGGI-----WVGAYRRKACWDKKNLNKTE 126

  Fly   305 ---------TDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL 348
                     ||....||..|.        ..|.||.|:: .......|.|::|
 Worm   127 CSKELQYQWTDRNTVGNLMWK--------KRWTAGAPHD-NTVGDHHEYCVQL 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 28/139 (20%)
C49C3.11NP_503089.2 CLECT 50..210 CDD:153057 27/137 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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