DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and ACAN

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001356197.1 Gene:ACAN / 176 HGNCID:319 Length:2568 Species:Homo sapiens


Alignment Length:187 Identity:46/187 - (24%)
Similarity:76/187 - (40%) Gaps:54/187 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FDYDVQESLQSVESEQHDQYYGNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYY 251
            ::.|:.|..|.|..|..::|.|:.:...|.                                   
Human  2346 YEGDLCEIDQEVCEEGWNKYQGHCYRHFPD----------------------------------- 2375

  Fly   252 LGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWM 316
                 :..|..|.:.||....||:||.:.||.:.:..:.:|:.      ||...|...||:|.| 
Human  2376 -----RETWVDAERRCREQQSHLSSIVTPEEQEFVNNNAQDYQ------WIGLNDRTIEGDFRW- 2428

  Fly   317 ATGRPITFTNWNAGEPNNFRYENGEEENC-LELWNRDGKGLKWNDSPCSFETYFVCE 372
            :.|.|:.|.||...:|:|| :..||:  | :.:|:..|   :|||.||::...|.|:
Human  2429 SDGHPMQFENWRPNQPDNF-FAAGED--CVVMIWHEKG---EWNDVPCNYHLPFTCK 2479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/125 (30%)
ACANNP_001356197.1 Ig_Aggrecan 33..155 CDD:409481
Ig strand A 33..36 CDD:409481
Ig strand A' 39..41 CDD:409481
Ig strand B 45..53 CDD:409481
G1-A 48..141
Ig strand C 72..78 CDD:409481
Ig strand C' 83..86 CDD:409481
Ig strand D 104..109 CDD:409481
Ig strand E 115..121 CDD:409481
Ig strand F 129..136 CDD:409481
Ig strand G 146..155 CDD:409481
G1-B 152..247
Link_domain_CSPGs_modules_1_3 153..247 CDD:239594
G1-B' 253..349
Link_domain_CSPGs_modules_2_4 254..349 CDD:239597
G2-B 477..571
Link_domain_CSPGs_modules_1_3 478..572 CDD:239594
G2-B' 578..673
Link_domain_CSPGs_modules_2_4 579..674 CDD:239597
KS 677..849
PHA03307 716..>975 CDD:223039
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 734..979
12 X 6 AA approximate tandem repeats of E-[GVE]-P-[SFY]-[APT]-[TSP] 773..844
CS-1 852..1612
35 X 19 AA approximate tandem repeats of E-[IVDG]-[LV]-[EV]-[GTI]-[STA]-[ATV]-[SP]-[GA]-[VIFAD]- [GEDL]-[DE]-[LVI]-[SG]-[GERK]-[LV]-P-S-G 942..1612
PRK15387 <1433..>1614 CDD:185285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1499..1526
TamB 1511..2016 CDD:442155
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1543..1649
CS-2 1613..2277
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1687..1772
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1784..1827
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1883..1902
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1948..1977
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2048..2204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2249..2281
EGF_CA 2283..2313 CDD:238011
EGF_CA 2316..2352 CDD:238011 1/5 (20%)
CLECT_CSPGs 2358..2481 CDD:153058 42/175 (24%)
CCP 2485..2541 CDD:153056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2548..2568
Blue background indicates that the domain is not in the aligned region.

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