DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4d

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_034949.3 Gene:Clec4d / 17474 MGIID:1298389 Length:219 Species:Mus musculus


Alignment Length:161 Identity:42/161 - (26%)
Similarity:67/161 - (41%) Gaps:32/161 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 CVDESQY---TPNKWTMPLLKLGEKRYYLGIFFKAN----WFKATQYCRYHGMHLASISSQEEND 284
            |:.|...   |...||  ...:..:.:....:|..|    |.::.:.|.....||.:|:::.|.:
Mouse    66 CIREEPQPGATGGTWT--CCPVSWRAFQSNCYFPLNDNQTWHESERNCSGMSSHLVTINTEAEQN 128

  Fly   285 ----RLEKHIRDF-GLGHEHFWISGTDLADEGNFFWM--ATGRPITFTNWNAGEPNNFRYENGEE 342
                .|:|....| ||..|:.         ||.:.|:  ....|.| ..|..||.|:|.     |
Mouse   129 FVTQLLDKRFSYFLGLADENV---------EGQWQWVDKTPFNPHT-VFWEKGESNDFM-----E 178

  Fly   343 ENCLELWNRDGKGLKWNDSPCSFETYFVCEV 373
            |:|:.|.:...|.: |||.||.||...:|::
Mouse   179 EDCVVLVHVHEKWV-WNDFPCHFEVRRICKL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/134 (28%)
Clec4dNP_034949.3 CLECT_DC-SIGN_like 83..207 CDD:153060 36/139 (26%)

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