DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-88

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_872010.1 Gene:clec-88 / 174056 WormBaseID:WBGene00019606 Length:243 Species:Caenorhabditis elegans


Alignment Length:192 Identity:34/192 - (17%)
Similarity:62/192 - (32%) Gaps:78/192 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QERDQQPLANQEDFDYDVQESLQSVESEQHDQYYGNIFHRD-------PSENEVDNDCPNCVDES 231
            |..::||...|:.:::|.::             .|.|...|       ||:.         :|:|
 Worm    36 QITEEQPHQRQKLYNWDYKD-------------LGTIAFEDIPFPTLQPSQT---------IDQS 78

  Fly   232 QYTPNKWTMPLLKLGEKRYY-----LGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIR 291
            :..|..|    ::..:..|:     ||      :.||.:.|......|...:|.:|.:.:..|.:
 Worm    79 ENCPEGW----IRYSDSCYWVETELLG------FAKAERKCSEKQSTLFVANSIDEWEAIRGHSK 133

  Fly   292 DFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDG 353
            |                              :|::| .|......||..|:   |..|..:|
 Worm   134 D------------------------------SFSSW-IGLVRFSHYERSEQ---LPRWQTEG 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 20/110 (18%)
clec-88NP_872010.1 CLECT 81..172 CDD:214480 22/125 (18%)

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