DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-88

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_872010.1 Gene:clec-88 / 174056 WormBaseID:WBGene00019606 Length:243 Species:Caenorhabditis elegans


Alignment Length:192 Identity:34/192 - (17%)
Similarity:62/192 - (32%) Gaps:78/192 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QERDQQPLANQEDFDYDVQESLQSVESEQHDQYYGNIFHRD-------PSENEVDNDCPNCVDES 231
            |..::||...|:.:::|.::             .|.|...|       ||:.         :|:|
 Worm    36 QITEEQPHQRQKLYNWDYKD-------------LGTIAFEDIPFPTLQPSQT---------IDQS 78

  Fly   232 QYTPNKWTMPLLKLGEKRYY-----LGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIR 291
            :..|..|    ::..:..|:     ||      :.||.:.|......|...:|.:|.:.:..|.:
 Worm    79 ENCPEGW----IRYSDSCYWVETELLG------FAKAERKCSEKQSTLFVANSIDEWEAIRGHSK 133

  Fly   292 DFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDG 353
            |                              :|::| .|......||..|:   |..|..:|
 Worm   134 D------------------------------SFSSW-IGLVRFSHYERSEQ---LPRWQTEG 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 20/110 (18%)
clec-88NP_872010.1 CLECT 81..172 CDD:214480 22/125 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161736
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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