DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-109

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001252096.1 Gene:clec-109 / 173183 WormBaseID:WBGene00008907 Length:239 Species:Caenorhabditis elegans


Alignment Length:176 Identity:36/176 - (20%)
Similarity:67/176 - (38%) Gaps:48/176 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IRPTLIVVLISLASVDSG---HNSPVTTIPVAEPISQVPHGFQLGQNNHISSSSNISRS--GGGN 61
            ::|..:::||...::..|   :.:|...|.:      :.|   :|.::..||||:..||  ...|
 Worm     1 MKPLHLLLLIIWVTITLGNFRNENPRKVIKI------IKH---VGSSSSYSSSSSEERSKRRHKN 56

  Fly    62 GRDKRGAQLDPSEIARQNQIT----------QQIFANYLE-----------RRLFPNRTANQKIP 105
            .|....::..|:....::.||          :..:.|..:           .||...:.||::: 
 Worm    57 SRLTHSSRSRPTRTCPRDWITFERPQGRWCMKAFYGNMFQPEAEAKCNAVGARLSGLQNANERM- 120

  Fly   106 TIADILPKPKPSPRPRPRGFA-ASDGGNFKRSGGGAQRNRLAAAAS 150
            ||:.:|           ||.. ...||.:....||.:|.|.....|
 Worm   121 TISYVL-----------RGLIYQHGGGRYTAWLGGKRRARCPTGTS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057
clec-109NP_001252096.1 CLECT 71..>167 CDD:214480 19/97 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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