DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-99

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_492872.1 Gene:clec-99 / 173011 WormBaseID:WBGene00013933 Length:226 Species:Caenorhabditis elegans


Alignment Length:176 Identity:38/176 - (21%)
Similarity:57/176 - (32%) Gaps:55/176 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 DFDYDVQESLQSVESEQHDQYYGNIFHRDPSENEVDNDC-------PN---CVDESQYTPNKWTM 240
            |||....||.:  ||.:|....|:....:...|....|.       |:   ||   :..|..:..
 Worm    21 DFDSSSSESCE--ESHEHKHGGGHEGGNNGGGNNRGCDAGWTRFNRPSGGWCV---RVFPGTYHQ 80

  Fly   241 PLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRD----------FGL 295
            ||                    |...|:..|..|..:.:|||..::...:..          .||
 Worm    81 PL--------------------AESRCQSQGAVLTGVQNQEEAKKIASLLLPQISQQSGSIYIGL 125

  Fly   296 GHEHFWISGTDLADEGN----FFWMATGRPITFTN---WNAGEPNN 334
             |.....|.:.::...|    |.|  |....|.|:   ||..:|:|
 Worm   126 -HRTPACSKSPISSSCNSMNSFHW--TDGSTTGTDGLLWNNNQPDN 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 21/103 (20%)
clec-99NP_492872.1 CLECT 55..179 CDD:214480 28/140 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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