DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-95

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_492868.1 Gene:clec-95 / 173010 WormBaseID:WBGene00013927 Length:229 Species:Caenorhabditis elegans


Alignment Length:232 Identity:42/232 - (18%)
Similarity:70/232 - (30%) Gaps:52/232 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 LANQEDFDYDVQESLQSVESEQHDQYYGN---IFHRDPSENEVDNDCPNCVDESQYTPNKWTMPL 242
            ||...|||....||.:......|....||   ..:.:.:....:..|.......:.....|.:  
 Worm    12 LAAAIDFDSSSSESCEDGNGHGHGHGNGNGNGNGNGNGNGGRANGGCETGWRHFRRPSGSWCV-- 74

  Fly   243 LKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEK-HIRDFGLGHEHFWISG-- 304
                  |.:.|   :.|...|...|:..|..|:.:.:.||...:.. .:...|......|:..  
 Worm    75 ------RVFGG---RLNQGAAQSQCQSFGATLSGLRNLEEARTISNLALSVIGRSSGGIWLGARR 130

  Fly   305 ----------TDLADEGNFFWMATGRPIT--FTNWNAGEPNNFRYENGEEENCLELW-------- 349
                      |..:...:|.|..:....|  |. ||..:|:|    :.....|..|.        
 Worm   131 TTACAKQHKTTSCSTTSSFRWTDSSASGTAGFV-WNNVQPDN----SDLNSQCAVLHAGSSAATV 190

  Fly   350 -NRDGKGLKWNDSPCSFETY---------FVCEVQPN 376
             |...:....:|..|||:..         :||..:|:
 Worm   191 SNAVWQPAMMDDVTCSFDPAGRDPRSIYGYVCGKKPS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 29/156 (19%)
clec-95NP_492868.1 CLECT 72..224 CDD:153057 30/167 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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