DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and clec-53

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_491247.2 Gene:clec-53 / 171967 WormBaseID:WBGene00020191 Length:308 Species:Caenorhabditis elegans


Alignment Length:154 Identity:35/154 - (22%)
Similarity:54/154 - (35%) Gaps:57/154 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 WFKATQY-----------------CRYHGMHLASISSQEENDRLEKHIRDFGLG----------- 296
            ||:.|.:                 |:..|..||||.|..||..|      .||.           
 Worm   172 WFETTDFCYKTTVQFTNFNDARSACQADGGDLASIHSIAENAFL------VGLSKAGITNKDKDW 230

  Fly   297 HEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELW----------NR 351
            ::..||.   |..:.:.:....|..:.:.||..|||||...|          |          .:
 Worm   231 NDDVWIG---LVYQNSKWQWTDGSVVNYVNWGDGEPNNMNKE----------WWTALVADPHEGK 282

  Fly   352 DGKGLKWNDSPCSFETYFVCEVQP 375
            :.:|.:||:.|...:..|:|::.|
 Worm   283 NSEGTRWNNVPQDDQRAFLCKIAP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 34/150 (23%)
clec-53NP_491247.2 CLECT 32..147 CDD:153057
CLECT 166..303 CDD:214480 33/149 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.