DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and CLEC4C

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_569708.1 Gene:CLEC4C / 170482 HGNCID:13258 Length:213 Species:Homo sapiens


Alignment Length:189 Identity:40/189 - (21%)
Similarity:73/189 - (38%) Gaps:55/189 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 QHDQYYGNIFHRDPSENEVDNDCPNCVDESQ------YTPNKWTMPLLKLGEKRYYLGIFFKANW 260
            ::.||:.::               .||.|.:      ..|..||    ......|::....: :|
Human    60 EYQQYHPSL---------------TCVMEGKDIEDWSCCPTPWT----SFQSSCYFISTGMQ-SW 104

  Fly   261 FKATQYCRYHGMHLASISSQEENDRLEKHIRD-----FGL----GHEHF-WISGTDLADEGNFFW 315
            .|:.:.|...|..|..|:::||.|.:.::::.     .||    |..|: |:..|...:.     
Human   105 TKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNEN----- 164

  Fly   316 MATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
                  :||  |::|||||.      :|.|..:..|..:...|||..|......:|:::
Human   165 ------VTF--WHSGEPNNL------DERCAIINFRSSEEWGWNDIHCHVPQKSICKMK 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 32/133 (24%)
CLEC4CNP_569708.1 CLECT_DC-SIGN_like 83..208 CDD:153060 35/148 (24%)

Return to query results.
Submit another query.