DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and CLEC4F

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_011530937.1 Gene:CLEC4F / 165530 HGNCID:25357 Length:699 Species:Homo sapiens


Alignment Length:86 Identity:28/86 - (32%)
Similarity:43/86 - (50%) Gaps:12/86 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 GEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADE 310
            |...||.. ..|.:|.:|.|:|...|.||||::|:||    :..:.:| ....::||..||...|
Human   587 GGSLYYFS-SVKKSWHEAEQFCVSQGAHLASVASKEE----QAFLVEF-TSKVYYWIGLTDRGTE 645

  Fly   311 GNFFWMATGRPITFTNWNAGE 331
            |::.| ..|.|     :||.:
Human   646 GSWRW-TDGTP-----FNAAQ 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 27/83 (33%)
CLEC4FXP_011530937.1 CCDC158 <207..>581 CDD:464943
CLECT_DC-SIGN_like 581..>657 CDD:153060 26/81 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.