DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec6a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_031747367.1 Gene:clec6a / 116406739 XenbaseID:XB-GENE-29091915 Length:372 Species:Xenopus tropicalis


Alignment Length:235 Identity:58/235 - (24%)
Similarity:91/235 - (38%) Gaps:42/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LAAAASKRQSGYNRKRLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYY-- 207
            |.:..|..|.|...:..|.:.:...|....|...|..:||       ..:||....:....||  
 Frog   158 LNSTLSLLQEGLIPELQRNQTQLLLELVGLETTYQNHSNQ-------SRALQGTYEQLKGTYYFI 215

  Fly   208 ---GNIF-HRDPSENEVDND-CPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYC 267
               |.:. |....::|.|:. ||.|:       :.|..    ||...|.|....: :|.:::.:|
 Frog   216 PREGPLLQHCGLRDSESDSRVCPFCL-------SGWHF----LGTSCYLLSSEAE-SWEESSVWC 268

  Fly   268 RYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEP 332
            |..|.||..|:...|.|.:      ..|.:|..||..:||..||::.| ..|..|....|..|:|
 Frog   269 RKEGGHLVVINGTAEQDSV------LELLNETVWIGLSDLEAEGDWRW-EDGSHIESRFWLPGQP 326

  Fly   333 NNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            :|    :|::: |..|....|    |....|:.....:||
 Frog   327 SN----SGDDD-CATLVPTAG----WKADRCAKLYLGLCE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 34/124 (27%)
clec6aXP_031747367.1 CLECT 240..358 CDD:470576 38/146 (26%)

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