DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and LOC110438854

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021327938.1 Gene:LOC110438854 / 110438854 -ID:- Length:80 Species:Danio rerio


Alignment Length:75 Identity:24/75 - (32%)
Similarity:34/75 - (45%) Gaps:15/75 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 FWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL--WNRDGKGLKWNDSP 362
            |||..||...|..:.|:....|  |.||.:||||:    :...|:|.::  |.       |.|.|
Zfish    14 FWIGLTDQEVEDKWIWVDGSSP--FNNWQSGEPNS----HAGNEDCAQVNPWG-------WADYP 65

  Fly   363 CSFETYFVCE 372
            |.....::||
Zfish    66 CGSTFKWICE 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 24/75 (32%)
LOC110438854XP_021327938.1 CLECT <13..76 CDD:321932 24/75 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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