DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and LOC108179137

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_017212678.2 Gene:LOC108179137 / 108179137 -ID:- Length:254 Species:Danio rerio


Alignment Length:124 Identity:36/124 - (29%)
Similarity:59/124 - (47%) Gaps:16/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 KRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGN 312
            :|.|..|....||.:|.:|||.:...||::.:..:..:|.|.:.|.|:  :..|| |....|...
Zfish    18 QRQYHFINENKNWTEAQRYCRENYTDLATVDNMNDMIQLMKSVNDGGV--QKIWI-GLQKTDVYK 79

  Fly   313 FFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVC 371
            :.| ::|.|::|.||.:|:|      .|..| |..:.|.     :|.:..||....|:|
Zfish    80 WHW-SSGDPVSFLNWTSGDP------AGSNE-CTVMNNG-----QWANEACSNTRVFIC 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 36/123 (29%)
LOC108179137XP_017212678.2 CLECT_1 19..127 CDD:153072 36/123 (29%)
CLECT 127..236 CDD:321932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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