DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and Olr1

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_619589.2 Gene:Olr1 / 108078 MGIID:1261434 Length:363 Species:Mus musculus


Alignment Length:282 Identity:60/282 - (21%)
Similarity:91/282 - (32%) Gaps:96/282 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 KRLREEQEEEEE---------------ADDQERDQQPLANQEDFDYDVQESLQSVESEQHD--QY 206
            ::|.|:.:|:||               |:..|..|:.|..:.|   .:...|.....||.:  |.
Mouse   110 QKLNEKSKEQEELLQKNQNLQEALQRAANSSEESQRELKGKID---TITRKLDEKSKEQEELLQM 171

  Fly   207 YGNIFHRDPSENEVDNDCPNCVDESQ-YTPNKWTMPLLKLGEKRYYLGIFFKAN----------- 259
            ..|:       .|......|..:||| ....|.....|||.||........:.|           
Mouse   172 IQNL-------QEALQRAANSSEESQRELKGKIDTLTLKLNEKSKEQEELLQKNQNLQEALQRAA 229

  Fly   260 -----------WFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTD------- 306
                       |.|...|. :||..     |.|:|.:..:     .||.:...|:|.|       
Mouse   230 NFSGPCPQDWLWHKENCYL-FHGPF-----SWEKNRQTCQ-----SLGGQLLQINGADDLTFILQ 283

  Fly   307 -LADEGNFFWMA-----TGRPITFTNWNAGEPNNFR-----------YENGEEENCLELWNRDGK 354
             ::...:.||:.     .|:|..   |..|.|.||:           |.:|   ||..|  :||.
Mouse   284 AISHTTSPFWIGLHRKKPGQPWL---WENGTPLNFQFFKTRGVSLQLYSSG---NCAYL--QDGA 340

  Fly   355 GLKWNDSPCSFETYFVCEVQPN 376
            ....|   |....:.:|:.:.|
Mouse   341 VFAEN---CILIAFSICQKKTN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 33/169 (20%)
Olr1NP_619589.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Neck 55..241 27/140 (19%)
Apolipoprotein 71..229 CDD:279749 27/128 (21%)
Seryl_tRNA_N <96..175 CDD:299883 14/67 (21%)
eIF-4B <156..214 CDD:283846 16/64 (25%)
CLECT_NK_receptors_like 235..356 CDD:153063 32/142 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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