DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and LOC101886459

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021327538.1 Gene:LOC101886459 / 101886459 -ID:- Length:140 Species:Danio rerio


Alignment Length:166 Identity:32/166 - (19%)
Similarity:54/166 - (32%) Gaps:49/166 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 SENEVDNDCPNCVDESQY--------TPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGM 272
            |.:|::...|.|..|..:        .|.:|..     |...:|:......||..:..:||....
Zfish    12 SVSELEQGGPVCTYEKDWRSINFCPDLPEQWFK-----GNGSFYVFSSHNRNWSSSQNHCRGLDG 71

  Fly   273 HLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRY 337
            .|..||::||.:.|...:...|               |.:.:|..:...:               
Zfish    72 DLVIISNKEEKEFLTGMLCAIG---------------ESDLYWSGSRTDL--------------- 106

  Fly   338 ENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCEV 373
             :.::.||..|     ||....|..|..|...:||:
Zfish   107 -DHKQLNCAAL-----KGNTQEDVSCLREEKSICEI 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 23/123 (19%)
LOC101886459XP_021327538.1 CLECT 39..135 CDD:321932 25/136 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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