DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch73-122g19.1

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005155331.2 Gene:si:ch73-122g19.1 / 101884707 ZFINID:ZDB-GENE-110411-239 Length:337 Species:Danio rerio


Alignment Length:306 Identity:62/306 - (20%)
Similarity:106/306 - (34%) Gaps:84/306 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 DGGNFKRS------GGGAQ------RNRLAAAASKRQSGYNRKRLREEQEEEEEADDQERDQQPL 181
            |..|.|::      .||.|      .|.:....|..:...|..|:   |..|...:|.||.:...
Zfish    47 DDENIKKATTWRIQKGGRQTTDDIYENDVIGCISGEEINDNTMRI---QSSELTGNDLERMKSFR 108

  Fly   182 A-------------------------NQEDFDYDVQESLQSVESEQHDQYYGNIFHRDPSENEVD 221
            |                         |..::..:.::.|.:: :|...:...||.:.....|::.
Zfish   109 AALVCLILLCVLLLTAVLVLSVFIYTNSINYTEERRQLLTNI-TEDRAKLLTNITNLTEKSNQLL 172

  Fly   222 NDCPNCVDESQYTPNKWTMPLLKLGEKRYYLG---------IFFKAN----WFKATQYCRYHGMH 273
            .:..|.::|:...  ||....|....|:...|         .::|:|    |..:...|...|..
Zfish   173 QNNTNLLNETDQL--KWKKENLLNQLKKILTGDGWTYNQSSFYYKSNISKTWIVSRSDCIARGAD 235

  Fly   274 LASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWM---ATGRPITFTNWNAG--EPN 333
            |..|::|:|.|.:.:......:     ||...|:..||.:.|:   |....::|  |.:|  |||
Zfish   236 LIIINNQQEQDFVMRKSNVAAV-----WIGLNDIIVEGTWRWVDGSAMKNDLSF--WASGSNEPN 293

  Fly   334 NFRYENGEEENCL-------ELWNRDGKGLKWNDSPCSFETYFVCE 372
                 ....|||:       |.....|    |:|..|.....::||
Zfish   294 -----GDTNENCVVSADKVTEWPYTSG----WSDVSCERTFQWICE 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 34/149 (23%)
si:ch73-122g19.1XP_005155331.2 CLECT_DC-SIGN_like 203..331 CDD:153060 33/144 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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