DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec4d

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_017948241.1 Gene:clec4d / 101731344 XenbaseID:XB-GENE-29085291 Length:175 Species:Xenopus tropicalis


Alignment Length:198 Identity:52/198 - (26%)
Similarity:79/198 - (39%) Gaps:62/198 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 QESLQSV-ESEQHDQYYGNIFH-RDPSEN-EVDNDCP----NCVDESQYTPNKWTMPLLKLGEKR 249
            |:.||:: ::||...:...|.. :.|.|. :.|:|..    ||                      
 Frog    21 QDILQAIRKNEQRASFQTQITSIKQPLERPQCDSDWKGFDGNC---------------------- 63

  Fly   250 YYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEK--HIRDFGLG-------HEHFWISGT 305
            ||: :..|..|..|...|:.....|..|:|:.|.:.|..  .:.||.:|       :|..|:.||
 Frog    64 YYI-VTTKKAWTDARAACKLKNSDLVIINSEREQNFLSSITDMSDFWIGLKGNTDKNEWRWVDGT 127

  Fly   306 -DLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYF 369
             ....||  ||:            .|||||    :|.:|:|:.:  |..|  ||||..||.:...
 Frog   128 IHKLSEG--FWL------------KGEPNN----SGGQEDCVHM--RVQK--KWNDIVCSNQYKA 170

  Fly   370 VCE 372
            :||
 Frog   171 ICE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 40/134 (30%)
clec4dXP_017948241.1 CLECT_DC-SIGN_like 52..174 CDD:153060 44/167 (26%)

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