DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec19a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_038953831.1 Gene:Clec19a / 100909498 RGDID:6503302 Length:234 Species:Rattus norvegicus


Alignment Length:170 Identity:35/170 - (20%)
Similarity:51/170 - (30%) Gaps:56/170 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 NQEDFDYDVQESLQSVESE-QHDQYYGNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLG 246
            |.|:.|.....|||..|.: .|:.|:...........|....| .                    
  Rat    12 NLENSDLGTSASLQFREKKIDHNSYWRTTLDEKSRLLEFKGPCXR-------------------- 56

  Fly   247 EKRYYLGIFFKAN--WFKATQYC-----RYHGMHLASISSQEEN----DRLEKHIRD------FG 294
                    ||..|  |.:|..:|     ......:.||.|.||:    |.:...:.|      .|
  Rat    57 --------FFPINKIWAEANIHCPQFTASRKSAKMVSIHSWEESVFVYDLVNSCVPDIPADTCMG 113

  Fly   295 LGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNN 334
            | ..|        ..||.|.| :.|.|..::.|:..:|.:
  Rat   114 L-RVH--------RQEGQFEW-SDGSPYGYSYWDRSQPGD 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 24/103 (23%)
Clec19aXP_038953831.1 CLECT 49..194 CDD:470576 26/133 (20%)

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