DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment tfc and LOC100537194

DIOPT Version :9

Sequence 1:	NP_612091.1	Gene:	tfc / 38141	FlyBaseID:	FBgn0035199	Length:	376	Species:	Drosophila melanogaster
Sequence 2:	XP_017211404.1	Gene:	LOC100537194 / 100537194	-ID:	-	Length:	306	Species:	Danio rerio

Alignment Length:	232	Identity:	56/232 - (24%)
Similarity:	93/232 - (40%)	Gaps:	38/232 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   143 NRLAAAASKRQSGYNRKRLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYY 207
            |.|:....:.::.||...|.:.|.|::......:..|           ::.|:..: |.|..|..
Zfish   110 NSLSLGKHQLETKYNSLSLEKHQLEDKYNSLSLKKHQ-----------LETSVDEL-SAQKSQLQ 162

  Fly   208 GNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFF--KANWFKATQYCRYH 270
            .|.......:.|::|...:..||              |.:.|...|.||  :.:|.::.|:||..
Zfish   163 NNSNSLSQKKLELENRVTSLSDE--------------LKKARSKQGWFFTEEKSWSESRQFCRNR 213

  Fly   271 GMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNF 335
            |..|..|.|:.:...:...::      |..||..:|...||...|: ...|:....|..|||||:
Zfish   214 GAELVIIKSEVKQRVISSLVK------EDVWIGLSDTETEGTMKWV-DNSPMNQGFWARGEPNNY 271

  Fly   336 RYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            |   .::|:|:|:....|....|||..||.....:||
Zfish   272 R---SQDEDCVEVRISQGIPNNWNDLRCSDRRKGICE 305

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
tfc	NP_612091.1	CLECT	249..373	CDD:153057	38/126 (30%)
LOC100537194	XP_017211404.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1509611at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22802
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	3.020