DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and LOC100537143

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_009293464.2 Gene:LOC100537143 / 100537143 -ID:- Length:307 Species:Danio rerio


Alignment Length:232 Identity:55/232 - (23%)
Similarity:89/232 - (38%) Gaps:38/232 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 NRLAAAASKRQSGYNRKRLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYY 207
            |.|:....:.::.||...|.:.|.|::......:..|...:.:|.            |.|..|..
Zfish   111 NSLSLGKHQLETKYNSLSLEKHQLEDKYNSLSLKKHQLETSVDDL------------SAQKSQLQ 163

  Fly   208 GNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFF--KANWFKATQYCRYH 270
            .|.......:.|::|...:..||              |.:.|...|.||  :.:|.::.|:||..
Zfish   164 NNSNSLSQKKLELENRVTSLSDE--------------LKKARSKQGWFFTEEKSWSESRQFCRNR 214

  Fly   271 GMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNF 335
            |..|..|.|:.:...:...::      |..||..:|...||...|: ...|:....|..|||||:
Zfish   215 GAELVIIKSEVKQRVISSLVK------EDVWIGLSDTETEGTMKWV-DNSPMNQGFWARGEPNNY 272

  Fly   336 RYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            .   ..:|:|:|:....|....|||..||.....:||
Zfish   273 L---NLDEDCVEVRISQGIPNNWNDLRCSDRRKGICE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/126 (29%)
LOC100537143XP_009293464.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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