DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and LOC100535655

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_017209117.1 Gene:LOC100535655 / 100535655 -ID:- Length:308 Species:Danio rerio


Alignment Length:248 Identity:64/248 - (25%)
Similarity:96/248 - (38%) Gaps:70/248 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 NRKRLREEQEEE---------EEADD---------QERDQ--QPLANQEDFDYDVQESLQSVESE 201
            ||..:..||.::         ||.|.         :||||  :.|.:::|            :.|
Zfish    96 NRITILTEQSDQLLINMTNLTEERDQLLINLINLTKERDQRVKVLNSEKD------------QLE 148

  Fly   202 QHDQYYGNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMP--LLKLGEKRYYLG-IFF----KAN 259
            ..:|...|...|..|||:     ......:|....|..|.  |.:||...||.. ::|    |.:
Zfish   149 NENQIQKNKEKRLSSEND-----SLMKQRAQLQQEKIEMQRCLQELGGCFYYQSRLYFISSEKRS 208

  Fly   260 WFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITF 324
            |.::.:||......|..|:::||.|.:||.     .|....||..||.|:|..:.|      :..
Zfish   209 WSESRRYCTDRKADLIIINNREELDFVEKI-----SGGALVWIGLTDRANEDIWKW------VDD 262

  Fly   325 TN-----WNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            |:     ||.||||.:     ..|:| .::...|    |.|.||......:||
Zfish   263 TSLIPGFWNHGEPNGY-----HSEDC-AVFRSSG----WADYPCHSTFRSICE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/134 (28%)
LOC100535655XP_017209117.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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