DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and clec19a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_002932255.2 Gene:clec19a / 100491258 XenbaseID:XB-GENE-6049079 Length:193 Species:Xenopus tropicalis


Alignment Length:131 Identity:39/131 - (29%)
Similarity:64/131 - (48%) Gaps:16/131 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 FFKAN--WFKATQYCRYHGM-----HLASISSQEEN----DRLEKHIRDFGLGHEHFWISGTDLA 308
            ||..|  |.:|..||....:     .|.||.|.:||    |.:...:.  |:..: .||..:|..
 Frog    61 FFPMNKTWAEADFYCSEFSLGRTTAKLVSIHSWDENVFVFDLVNSQVT--GVPTD-IWIGLSDRR 122

  Fly   309 DEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLK-WNDSPCSFETYFVCE 372
            .||.|.| ..|.|..::.|:..:|::....:.|:|:|:::|.|....|: |||:.|:....|||:
 Frog   123 QEGEFEW-TDGTPNDYSYWDGNQPDDATNSSPEDEDCVQMWYRYYSALRSWNDNSCNRGFPFVCK 186

  Fly   373 V 373
            :
 Frog   187 I 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 39/129 (30%)
clec19aXP_002932255.2 CLECT_CEL-1_like 47..187 CDD:153059 39/129 (30%)

Return to query results.
Submit another query.