DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec3a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005170829.1 Gene:clec3a / 100330122 ZFINID:ZDB-GENE-111103-33 Length:194 Species:Danio rerio


Alignment Length:227 Identity:50/227 - (22%)
Similarity:82/227 - (36%) Gaps:60/227 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QSGY-----NRKRLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYYGNIFH 212
            |.||     .:|.:...|.||::          :..|.|..:....||:.:::.|.....|...|
Zfish    17 QDGYGHPSRTKKAVPARQREEDD----------MKTQIDKLWQEVNSLKEMQALQTVCLRGIKAH 71

  Fly   213 RDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASI 277
            |         .|....|::                |.|:          :|.:.|...|..||..
Zfish    72 R---------KCYLVSDQA----------------KHYH----------EANEDCISQGGTLAIP 101

  Fly   278 SSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAG--EPNNFRYENG 340
            ....||:.|..:.:........|||..||:..||.:. .....|::|..|:..  ||.     .|
Zfish   102 RDVNENEELRDYAKRSSPAARDFWIGITDIVREGQYV-DVNSLPVSFFYWDRAKKEPT-----GG 160

  Fly   341 EEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            :.|:|:.| :...:| ||:|..|..:..::||
Zfish   161 KRESCVAL-SLSAQG-KWHDEVCRSQKKYICE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 32/126 (25%)
clec3aXP_005170829.1 CLECT_tetranectin_like 64..191 CDD:153066 38/170 (22%)

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