DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch211-125e6.11

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001124136.1 Gene:si:ch211-125e6.11 / 100170830 ZFINID:ZDB-GENE-070912-35 Length:146 Species:Danio rerio


Alignment Length:141 Identity:46/141 - (32%)
Similarity:62/141 - (43%) Gaps:23/141 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PNKWTMPLLKLGEKRYYLGIFF--KANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGH 297
            |..|    :..|.|.|.   ||  ..:|..|.:.|:..|.:|||:.::.|||.|...:.    ..
Zfish    23 PYGW----INTGVKCYK---FFSQSVSWITAEKNCQGFGGNLASVHNRLENDFLMNMVP----SS 76

  Fly   298 EHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL-WNRDGKGLKWNDS 361
            ...||.|.|...||.:.| ..|....:.||.:.||||.|     .|||:|: |..:.   .|||.
Zfish    77 SRCWIGGHDGEQEGQWLW-TDGSMFDYNNWCSDEPNNQR-----SENCMEINWTSNH---CWNDQ 132

  Fly   362 PCSFETYFVCE 372
            .||....|:||
Zfish   133 GCSTSMGFMCE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 42/127 (33%)
si:ch211-125e6.11NP_001124136.1 CLECT 32..144 CDD:153057 43/128 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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