DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch211-125e6.12

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001103299.1 Gene:si:ch211-125e6.12 / 100126100 ZFINID:ZDB-GENE-070912-36 Length:152 Species:Danio rerio


Alignment Length:140 Identity:49/140 - (35%)
Similarity:72/140 - (51%) Gaps:24/140 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEH 299
            |.:|.    :.|.:.:.| .....||..|.:.|:..|.:|||:.:..|||.|...|.:    .:.
Zfish    26 PRQWR----RSGSRCFRL-FSTSVNWATAEKNCQRLGGNLASVLNDVENDFLLSLIPN----SKR 81

  Fly   300 FWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL-W--NRDGKGLKWNDS 361
            |:|.|.:: ||.|:|| :.|.|..:|||.:|||||.     ..|:|||: |  ||     .||:.
Zfish    82 FFIGGYNV-DEQNWFW-SDGSPFGYTNWCSGEPNNM-----NTEHCLEINWTANR-----CWNNL 134

  Fly   362 PCSFETYFVC 371
            |||.|..::|
Zfish   135 PCSVELGYIC 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 46/126 (37%)
si:ch211-125e6.12NP_001103299.1 CLECT 35..146 CDD:153057 46/127 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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