DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sac1 and Synj

DIOPT Version :9

Sequence 1:NP_001189016.1 Gene:Sac1 / 38137 FlyBaseID:FBgn0283500 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster


Alignment Length:517 Identity:153/517 - (29%)
Similarity:245/517 - (47%) Gaps:75/517 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 APQSFIIEPNGGDELLVIGRHDKVTRVQPASGGLVANLRPTRRIC---GVLGTIHLLSCD----Y 75
            :|.|.::|.....:.::...|......|..:..:   .:...::|   |.||.:.|.:.:    :
  Fly    17 SPHSVLLEHRNKSDSILFESHAVALLTQQETDVI---RKQYTKVCDAYGCLGALQLNAGESTVLF 78

  Fly    76 LLVATHRLFVGVLNGAVVWRLAGYDIIPYIPNSFQR-KENENYLRLLRQTLDTKFFYF------- 132
            |::.|..:.:|.:....::|:.....:     |.|. ..||:.:..:|:.|::..|||       
  Fly    79 LVLVTGCVSMGKIGDIEIFRITQTTFV-----SLQNAAPNEDKISEVRKLLNSGTFYFAHTNASA 138

  Fly   133 ------SYRYDLTNSLQRQREVAQSRPEVSGLLQRAEQRFVWNGYV---LRQFNCDKMEKFQLPL 188
                  |||:|:|...||:::.           |..:.||.||..:   |.:|..| .:.:.|..
  Fly   139 SASGASSYRFDITLCAQRRQQT-----------QETDNRFFWNRMMHIHLMRFGID-CQSWLLQA 191

  Fly   189 VLGFVSINQVQINGQTFFWSIITRRSVQRAGTRLFCRGSDEQGHVANFVETEQIVEFNGQLTGFV 253
            :.|.|.:..|.|..:....:||:|.|.:|||||...||::::|:|||||||||::..:|.:|.:|
  Fly   192 MCGSVEVRTVYIGAKQARAAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQVIYVDGDVTSYV 256

  Fly   254 QTRGSMPFHWHQLPNLRYKPRPV-LVPG-KDHLAACGLHFKEQIRLYGNNVAVN-----LVDHKG 311
            |||||:|..|.| |.::.....| |..| :...||...|.....:.||....||     ||..|.
  Fly   257 QTRGSVPLFWEQ-PGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKE 320

  Fly   312 AEGELEATYARLVREMGNPQVRYESFDFHSECRKMRWDRLNILIDRLAHEQDQFGVYHVFDDGKL 376
            .|..|...:.|......:..|.:..||:|.|||...:..|..|.:|:......:||:|. .:|::
  Fly   321 GEAMLSNEFQRHHGMSAHKDVPHVVFDYHQECRGGNFSALAKLKERIVACGANYGVFHA-SNGQV 384

  Fly   377 VSTQTGVFRTNCIDCLDRTNVVQSMLARRSLTAVLQKLGV----LHVGQKVEHASDIFESIFKGV 437
            :..|.||.||||:|||||||.||:.|.       |..||:    |.:|.|.::.|. ||.||:.:
  Fly   385 LREQFGVVRTNCLDCLDRTNCVQTYLG-------LDTLGIQLEALKMGGKQQNISR-FEEIFRQM 441

  Fly   438 WADNADLVSLQYSGTCALKTDFTRTGKRTKSGAMQDGKNSLMRYYLNNFADGQRQDSIDLFL 499
            |.:|.:.||..|:||.|::          ....:.||..|..|...||..|..:|::||:.|
  Fly   442 WINNGNEVSKIYAGTGAIQ----------GGSKLMDGARSAARTIQNNLLDNSKQEAIDVLL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sac1NP_001189016.1 COG5329 3..566 CDD:227637 153/517 (30%)
Syja_N 62..344 CDD:280532 92/312 (29%)
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 91/309 (29%)
INPP5c_Synj 538..863 CDD:197323
DUF1866 862..1008 CDD:286093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D26060at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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