DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sac1 and syj2

DIOPT Version :10

Sequence 1:NP_612087.1 Gene:Sac1 / 38137 FlyBaseID:FBgn0283500 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_595311.1 Gene:syj2 / 2541098 PomBaseID:SPBC577.13 Length:889 Species:Schizosaccharomyces pombe


Alignment Length:670 Identity:144/670 - (21%)
Similarity:256/670 - (38%) Gaps:169/670 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 REENAVYDDMNLYIAPQSFIIEPNGGDELLVI-------GRHDKVTRVQPASGGLVANLRPTRRI 61
            |:|.:|......|.|   .|.:|:..|...:|       ...:|:...:...||        .:|
pombe     7 RKERSVAFITEKYAA---IIQKPSVKDSDCIITFTCISLEEFEKIKEYELLFGG--------EKI 60

  Fly    62 CGVLGTIHLLSCD-----YLLVATHRLFVGVLNGAVVWRLAGYDIIPYIPNSFQRKENENYLRLL 121
            .|.||..:.:..|     :|.||.        ...:|.|:...|.|       .:.||.:::.|.
pombe    61 LGTLGLFNYVCEDMKEGVFLCVAR--------KAKLVLRIGNRDPI-------SKLENVSFISLD 110

  Fly   122 RQTLDTKFF-------------------------------YFSYRYDLTNSLQRQREVAQSRPEV 155
            ::..|.:.|                               .:|.:|..|..:.....::|    :
pombe   111 QELWDEELFEPMPRNSSPSSTFSTSTSDLNNIEKDNLVNSEYSSKYSSTTRIYPYHSLSQ----L 171

  Fly   156 SGLLQ----------------RAEQR------FVWNGYVLRQFN-----CDKMEKFQLPLVL--- 190
            :.||.                ::||.      :.||.:::.:.:     ...:|||  |.:|   
pombe   172 TDLLTDGSFYVSTNISCFSRFQSEQPYGPKDIYCWNRFLITELDNHFSEAHILEKF--PNLLLHC 234

  Fly   191 --GFVSINQVQINGQTFFWSIITRRSVQRAGTRLFC--RGSDEQGHVANFVETEQIVEFNGQLTG 251
              |:|  .::.|:..:.  |||::  |...|:|...  .|.|:..:.:.|||||.|||....:..
pombe   235 FRGYV--ERMFIDSMSM--SIISK--VSSYGSRQTYPPSGIDDSSYCSMFVETEFIVEIAQTVFS 293

  Fly   252 FVQTRGSMPFHWHQLPNLRYKPR-PVLVPGKDHLAACGLHFKEQIRLYGNNVAVNLVDHKGAEGE 315
            |||.||::|..|.:..:..|.|. ..|...:...:....||.:..:.||:...::|:..||.|..
pombe   294 FVQVRGTVPCFWEEQFSSWYGPSISFLRSSQASQSLFNFHFSKLYKAYGDIYVIDLLQTKGFEAS 358

  Fly   316 LEATYARLVREMGNPQVRYESFDFHSECRKMRWDRLNILIDRLAHEQDQFG-VYHVFDDGKLVST 379
            |...|...:..:..|.|..:   ||......|.|....|...||.:..:.| .....::..|.|.
pombe   359 LYEAYKHHLMLLPFPAVVKK---FHFTPDPARPDIDPRLETDLADDLKEMGYTQKSIENDMLESF 420

  Fly   380 QTGVFRTNCIDCLDRTNVVQSMLARRSLTAVLQKLGVLHVGQKVEHASDIFESIFKGVWADNADL 444
            |.||||.|.:|||.||||:|..::|..|..:...|       ::....:|.|.: :.:|::|.|.
pombe   421 QKGVFRINDLDCLGRTNVIQYQISRLVLKDIFFNL-------QIGVTFNILEYL-RHLWSNNGDA 477

  Fly   445 VSLQYSGTCALKTDFTRTGKRTKSGAMQDGKNSLMRYYLNNFADGQRQDSIDLFLGKY------L 503
            ::...:|..::.:..||.|:::.:|::.|...|..|.|:..:.|.:.|::|.|.||.:      |
pombe   478 IAKLITGVGSIGSSATRRGRKSIAGSLSDISKSFGRMYVGRYPDVESQNAILLLLGCFPNQSPVL 542

  Fly   504 VND------------------------------NEGGAVPSPLESKH-----GWRFFTFPSVLLV 533
            :::                              |..|.|||..|.|.     |.|...:...::.
pombe   543 ISESVSSYIQGVLRQRRSEYRVERDFSIFSSTFNANGKVPSTDEFKRLLLPFGERTSAYDLYVVA 607

  Fly   534 AVAMFMITMTYPAEFNTENL 553
            ...:..:.|::....:.:.|
pombe   608 VQEIITLNMSHLVSSSNQKL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sac1NP_612087.1 COG5329 3..566 CDD:227637 144/670 (21%)
syj2NP_595311.1 COG5329 1..552 CDD:227637 133/593 (22%)
COG5411 539..>889 CDD:227698 12/89 (13%)

Return to query results.
Submit another query.