DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sac1 and Synj1

DIOPT Version :10

Sequence 1:NP_612087.1 Gene:Sac1 / 38137 FlyBaseID:FBgn0283500 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_011244377.1 Gene:Synj1 / 104015 MGIID:1354961 Length:1714 Species:Mus musculus


Alignment Length:550 Identity:157/550 - (28%)
Similarity:253/550 - (46%) Gaps:93/550 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SREENAVYDDMNLYIA------------PQSFIIEPNGGDELLVIGRHDKVTRVQPASGGLVANL 55
            ||.:.|..::..:..:            |.|.|:|....:|.|:.            ..|.||.|
Mouse   133 SRRKRAASEERRMAFSKGFRIYHKLDPPPFSLIVETRHKEECLMF------------ESGAVAVL 185

  Fly    56 RPTRR------------ICGVLGTIHLLSCD----YLLVATHRLFVGVLNGAVVWRLAGYDIIPY 104
            ....:            ..|:||.:.|...|    ||::.|..:.||.:..:.|:|:...:.|..
Mouse   186 SSAEKEAIKGTYAKVLDAYGLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISL 250

  Fly   105 IPNSFQRKENENYLRLLRQTLDTKFFYFSYR---YDLTNSLQRQREVAQSRPEVSGLLQRAEQRF 166
            ..::    .:|:.:..:|:.|::..|||::.   ..|..||...|.:.:         ...:.||
Mouse   251 RVDA----SDEDRISEVRKVLNSGNFYFAWSASGVSLDLSLNAHRSMQE---------HTTDNRF 302

  Fly   167 VWNGYV---LRQF--NCDKMEKFQLPLVLGFVSINQVQINGQTFFWSIITRRSVQRAGTRLFCRG 226
            .||..:   |:.:  |||   .:.|.|:.|.|.|..:....:.....:|:|.|.:|||||...||
Mouse   303 FWNQSLHLHLKHYGVNCD---DWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRG 364

  Fly   227 SDEQGHVANFVETEQIVEFNGQLTGFVQTRGSMPFHWHQLPNLRYKPRPVLV--------PGKDH 283
            :::.|||||||||||::..:..::.|:|.|||:|..|.| |.|:.....|.:        |..|.
Mouse   365 TNDDGHVANFVETEQVIYLDDCVSSFIQIRGSVPLFWEQ-PGLQVGSHRVRMSRGFEANAPAFDR 428

  Fly   284 LAACGLHFKEQIRLYGNNVAVNLVDHKGAEGEL-EATYARLVREMGNPQVRYESFDFHSECRKMR 347
                  ||:....|||..:.|||:..|..|..| :|..:.|........:...|||:|...:..:
Mouse   429 ------HFRTLKDLYGKQIVVNLLGSKEGEHMLSKAFQSHLKASEHASDIHMVSFDYHQMVKGGK 487

  Fly   348 WDRLNILIDRLAHEQDQFGVYHVFDDGKLVSTQTGVFRTNCIDCLDRTNVVQSMLARRSLTAVLQ 412
            .::|:.::.....:...:|.:: ||..::...|:|..||||:|||||||.||:.|....|...|:
Mouse   488 AEKLHSILKPQVQKFLDYGFFY-FDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLE 551

  Fly   413 KLGVLHVGQKVEHASDIFESIFKGVWADNADLVSLQYSGTCALKTDFTRTGKRTKSGAMQDGKNS 477
            .||:....|.|..    |:.:|:.:|:.|.|.:|..|:||.||:      || .|:|.::||..|
Mouse   552 ALGLAEKPQLVTR----FQEVFRSMWSVNGDSISKIYAGTGALE------GK-AKAGKLKDGARS 605

  Fly   478 LMRYYLNNFADGQRQDSID-LFLGKYLVND 506
            :.|...|||.|..:|::|| |.||..|.:|
Mouse   606 VTRTIQNNFFDSSKQEAIDVLLLGNTLNSD 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sac1NP_612087.1 COG5329 3..566 CDD:227637 156/549 (28%)
Synj1XP_011244377.1 COG5329 204..627 CDD:227637 139/457 (30%)
INPP5c_Synj1 680..1015 CDD:197332
RRM_SF 1014..1155 CDD:473069
PHA03247 <1207..1609 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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