DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Psf1 and CG32318

DIOPT Version :9

Sequence 1:	NP_612086.1	Gene:	Psf1 / 38136	FlyBaseID:	FBgn0035194	Length:	202	Species:	Drosophila melanogaster
Sequence 2:	NP_995952.1	Gene:	CG32318 / 2768976	FlyBaseID:	FBgn0052318	Length:	164	Species:	Drosophila melanogaster

Alignment Length:	188	Identity:	78/188 - (41%)
Similarity:	95/188 - (50%)	Gaps:	53/188 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 LKELERSSQTIPAFDDDGVRQVLEEIKAIFEENVAQASSYNASGDRSLWPLLNFRHAALQRNKRC 80
            |...||..::....|..|.|:|:  .:...:..:.:..::    |||..|          .:|:|
  Fly    29 LNSRERCIRSAEVVDVVGPREVV--TRHTLDSKLTKKFTF----DRSFGP----------ESKQC 77

  Fly    81 LLAYLYERCRRIKALRWEFGPIIPGDIKQALCEPEVTFFNNYSKSLAAYMCSA-GYNQGLPIDLT 144
                                     |:...:..|.:      .:.|..|.|:. .|.|     ..
  Fly    78 -------------------------DVYSVVVSPLI------EEVLNGYNCTVFAYGQ-----TG 106

  Fly   145 NNLRPPKSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQVESLVRQGILHHIA 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   107 NNLRPPKSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQVESLVRQGILHHIA 164

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Psf1	NP_612086.1	GINS_A_psf1	9..134	CDD:212548	18/118 (15%)
Psf1	NP_612086.1	GINS_B	153..201	CDD:425409	47/47 (100%)
CG32318	NP_995952.1	Motor_domain	17..>106	CDD:277568	20/128 (16%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5230
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1249159at2759
OrthoFinder	1	1.000	-	-		FOG0003503
OrthoInspector	1	1.000	-	-		otm3552
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.820