Protein Alignment Psf1 and kif3c

DIOPT Version :9

• Sequence 1: NP_612086.1
• Gene: Psf1 / 38136
• FlyBaseID: FBgn0035194
• Length: 202
• Species: Drosophila melanogaster
• Sequence 2: XP_002661420.3
• Gene: kif3c / 100333558
• -ID: -
• Length: 754
• Species: Danio rerio
• Alignment Length: 219
• Identity: 52/219 - (23%)
• Similarity: 78/219 - (35%)
• Gaps: 69/219 - (31%)

  Fly     3 RQTK--MFGEKAFDLLKELERSSQTIPAFDDDGVRQVLEEIKAIFEENVAQASSYNASGDRSLWP 65
            ||||  :.||:    |||..:.:.::.|..:            :....|...||:....|..|..
Zfish   252 RQTKTGVQGER----LKEATKINLSLSALGN------------VISALVDGRSSHVPYRDSKLTR 300

  Fly    66 LLNFRHAALQRNKRCLL-------AYLYE----------RCRRIKALRWEFGPIIPGDIKQALCE 113
            ||   ..:|..|.:.::       :|.||          |.:.||.     .|.:..|.|.||..
Zfish   301 LL---QDSLGGNAKTIMVATLGPASYNYEETLTTLRYANRAKNIKN-----KPRVNEDPKDALLR 357

  Fly   114 PEVTFFNNYSKSLAAYMCSAGYNQGLPIDLTNNLRPPKSL-------YIEVRCMEDYGKFELDDG 171
            .    |......|.|.:...|.       ||...|..:.|       ..|...:|||     ||.
Zfish   358 E----FQEEIARLKAQLDKRGM-------LTKRKRRSRRLRKIGEEEVEEEDDLEDY-----DDE 406

  Fly   172 EVIHLKKNSQHYLPRAQVESLVRQ 195
            |::  :|.:|.|: :.|.|.|.|:
Zfish   407 EIV--EKEAQEYM-KEQQEELERE 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psf1	NP_612086.1	GINS_A_psf1	9..134	CDD:212548	29/141 (21%)
		GINS_B	153..201	CDD:425409	15/50 (30%)
kif3c	XP_002661420.3	KISc_KIF3	9..341	CDD:276822	23/107 (21%)
		SMC_N	<411..>584	CDD:330553	7/18 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910