DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp61F and Kif3a

DIOPT Version :9

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_006246409.1 Gene:Kif3a / 84392 RGDID:621536 Length:726 Species:Rattus norvegicus


Alignment Length:775 Identity:245/775 - (31%)
Similarity:401/775 - (51%) Gaps:114/775 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NTSRQPQKKSNQNIQVYVRVRPLNSRER--CIRSAEVVDVVGPREVVTRHTLDS--KLTKKFTFD 67
            |.|.:|:  |..|::|.||.||||.||:  |.|.|..||.:  |..:|.|..||  :..|.||||
  Rat     4 NKSEKPE--SCDNVKVVVRCRPLNEREKSMCYRQAVSVDEM--RGTITVHKTDSSNEPPKTFTFD 64

  Fly    68 RSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVG-NETAELKSSWEDDSDI 131
            ..|||||||.|||::...|:|:.||.|||.|:|||||||||||.||.| .....|:         
  Rat    65 TVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLR--------- 120

  Fly   132 GIIPRALSHLFDELRMME--VEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQG 194
            |:||.:.:|:|..:...|  ..:.:|:||||:||||:.|||..|.|.::.:  .......|.|:.
  Rat   121 GVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEV--KERPDVGVYIKD 183

  Fly   195 LEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNL 259
            |....|::.||:.:::..|.:.|....|.||..|||||.:|:|.:...|.|::|...:::|||:|
  Rat   184 LSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHL 248

  Fly   260 VDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD-RAPHVPYRESKLTRLLQESLGG 323
            |||||||..:|.| ..|.|::|...||.||.|||.||:|||| ::.|||||.||||||||:||||
  Rat   249 VDLAGSERQAKTG-ATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGG 312

  Fly   324 RTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMA 388
            .:||.:.|.|.|...:.:||:|||.||:|||||:||..:|:. .|..:|:::.:||::||:.|..
  Rat   313 NSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINED-PKDALLRQFQKEIEELKKKLEE 376

  Fly   389 ARDKNG--IYLAEETYGEITLKLESQNRELNEK-----------------MLLLKALKDELQN-- 432
            ..:.:|  |..:||...|     |.:..|..||                 .::.|.|.:.|.:  
  Rat   377 GEEVSGSDISGSEEDDNE-----EGELGEDGEKRKKRRGSSSSSSSDSTCSVIEKPLDEFLPHQA 436

  Fly   433 -KEKIFSEVSMSLVEKTQELKKT--------EENLLNTKGTLLLTKKVLTKTKRRYKEKKELVAS 488
             |:|:..:..|.:..|..|.:|.        ||.....:..|...:|.|.|.::.::...|.:::
  Rat   437 GKKKVSPDKMMEMQAKIDEERKALETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSA 501

  Fly   489 HMKTEQVLTTQAQEILAAADLATDDTHQLHGTIERRRELDEKIRRSCDQFKDRMQDNLEMIGGSL 553
               .|:.:.....::||.|:.......:.:..:|.||:..|::|:   :.:::.|:.|::     
  Rat   502 ---LEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRK---ELEEKEQERLDI----- 555

  Fly   554 NLYQDQQAALKEQLSQEMVNSSYVSQRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKIS 618
               :::..:|:|:               |...:|.::.:..|...:..:..:|            
  Rat   556 ---EEKYTSLQEE---------------AQGKTKKLKKVWTMLMAAKSEMADL------------ 590

  Fly   619 DQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEE-NNQRHKAMLDSMQEKFATIIDSSLQSVEE 682
            .|..|..:..|:|.::|    :|:|::..:.:|:. ..|.::.|:::.......|.:..|:.|..
  Rat   591 QQEHQREIEGLLENIRQ----LSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAY 651

  Fly   683 HAKQMHKKLEQLGAMSLPDAEELQNLQEELANERALAQQEDALLESMMMQMEQIKNLRSK 742
            ....|.|:      ..:||.:|....:.:|::. .||..|::|.:| :|::|:.:..:.|
  Rat   652 TGNNMRKQ------TPVPDKKERDPFEVDLSHV-YLAYTEESLRQS-LMKLERPRTSKGK 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 165/355 (46%)
Kinesin 25..356 CDD:278646 157/338 (46%)
Microtub_bind 923..>1009 CDD:290642
Kif3aXP_006246409.1 KISc_KIF3 13..345 CDD:276822 160/345 (46%)
Kinesin 20..345 CDD:278646 157/338 (46%)
CENP-F_leu_zip 434..574 CDD:287450 28/168 (17%)
GBP_C <446..611 CDD:303769 34/209 (16%)
coiled coil 597..608 CDD:293879 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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