DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp61F and Kif3C

DIOPT Version :9

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster


Alignment Length:619 Identity:201/619 - (32%)
Similarity:305/619 - (49%) Gaps:86/619 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NQNIQVYVRVRPLNSRER---CIRSAEV----VDVVGPREVVTRHTLDSKLTKKFTFDRSFGPES 74
            ::||:|.||.||:|..|:   |....|:    |.|..|...:::.       |||.||..:..::
  Fly     2 SENIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQQ-------KKFIFDSVYNMKT 59

  Fly    75 KQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALS 139
            ....:|..:...|:|..:.|||.|:|||||||.||||||.|:|..        .:..||||:...
  Fly    60 DTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENF--------SNSTGIIPKCFD 116

  Fly   140 HLFDELRM-MEVEYTMRISYLELYNEELCDLLSTDDTTK-IRIFDDSTKKGSVIIQGLEEIPVHS 202
            |:|:.:.| ..|.|...::|||:|||.:.|||:.::.|. |..|........|.:..|...||.:
  Fly   117 HIFERISMTTNVRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVN 181

  Fly   203 KDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVH----IRENGIEGEDMLKIGKLNLVDLA 263
            .:..|..|..|.:.|.||.||||..||||||:|:|.:.    :...|.:....:..|||:|||||
  Fly   182 ANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLA 246

  Fly   264 GSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD-RAPHVPYRESKLTRLLQESLGGRTKT 327
            |||...|.| .:|.|::|...||.||..||.||::||| :|.|||:|:||||||||:||||.|||
  Fly   247 GSERQRKTG-AQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKT 310

  Fly   328 SIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMAAR-- 390
            .:|:.|||.....:||:|||.||.|||||.|||::|:. .|...|::|..||..|||.|..::  
  Fly   311 LMISCISPTDIHYDETISTLRYASRAKNISNKPKINED-PKDARLRQYQNEILYLKRMLQESQQI 374

  Fly   391 -----DKNGIYLAEETYGEITLKL---ESQNRELNEKML-LLKALKDELQNKEKIFSEVSMSLVE 446
                 |.|.|.       :..||:   .:.|...|.::: |.:..|...:....|.::.:..|::
  Fly   375 INKNNDPNKII-------KSPLKIIQHTNMNSTKNVQIIDLGRNCKASFKTNNSILTKPNFPLIQ 432

  Fly   447 KTQELKKTEENLLNTKGTLLLTKKVLTKTKRRYKEKKELVASHMKTEQVLTTQAQEILAAADLAT 511
            ..:|::      |..:..:.|.|:.|...:|.:  ..||...||..:..    ||..|:|..:|.
  Fly   433 SKEEVQ------LQARSRIDLIKRSLIGGERIH--DFELKEKHMARKYA----AQRHLSAIAIAL 485

  Fly   512 DDTHQLHGTIERRRELDEKIRRSCDQFKDRMQDNLEMIGGSLNLYQDQQAALKEQLSQEMVNSSY 576
            .                   |..|:. :|.:|.:...|...:::..|.....||::....:..|.
  Fly   486 S-------------------RVKCED-RDLLQGHYATITQEIDIKNDYIRKCKEKIKMLEMEVSD 530

  Fly   577 VSQRLALNSSKSIEMLKEMCAQSLQDQTNLHNKL 610
            ::....|:....::.::     :|..|...|.:|
  Fly   531 LNSEFQLDREDYLDEIR-----NLGRQVKFHQQL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 152/361 (42%)
Kinesin 25..356 CDD:278646 142/344 (41%)
Microtub_bind 923..>1009 CDD:290642
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 146/351 (42%)
Kinesin 10..339 CDD:278646 142/344 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437700
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D24620at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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