DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp61F and Kif19

DIOPT Version :10

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_001402044.1 Gene:Kif19 / 303659 RGDID:1559936 Length:997 Species:Rattus norvegicus


Alignment Length:1159 Identity:270/1159 - (23%)
Similarity:467/1159 - (40%) Gaps:284/1159 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NQNIQVYVRVRPLN---SRERCIRSAEVVD---------VVGPREVVTRHTLDSKLTKKFTFDRS 69
            :|.:.|.:||||::   ..|.....|..||         :..|.:::..|   ....|.:.||.:
  Rat     9 DQQLMVALRVRPISVSELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAH---RSREKSYLFDVA 70

  Fly    70 FGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGII 134
            |...:.|..||......|||.|::|||.||||||.||.|||:||:|.           |.:.||.
  Rat    71 FDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGT-----------DHEPGIY 124

  Fly   135 PRALSHLFD--ELRMMEVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEE 197
            .|.|:.||.  |....::||.:.:||||:|||.:.|||: .....:.:.:||  ||.:.:.|:.|
  Rat   125 VRTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLN-PALGYLELREDS--KGVIQVAGITE 186

  Fly   198 IPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDL 262
            :...:..::.:||.||..:|....|..|..|||||.|..:.|..|.........::.|:|.::||
  Rat   187 VSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRNRVKNILQEVRQGRLFMIDL 251

  Fly   263 AGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRA--PHVPYRESKLTRLLQESLGGRT 325
            ||||..|:..| :|.|::|..:||:|||.||..|.||.|:.  .::.||:|||||||::||||.:
  Rat   252 AGSERASQTQN-RGQRMKEGAHINRSLLALGNCINALSDKGGNKYINYRDSKLTRLLKDSLGGNS 315

  Fly   326 KTSIIATISPGHKDIEETLSTLEYAHRAKNI-----QNKPEVNQKLTKKT-VLKEYTEEIDKL-- 382
            :|.:||.|||.....||:.:||.||.|||||     ||...|:..:.:.| ::.:...||.:|  
  Rat   316 RTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKC 380

  Fly   383 KRDLMAAR-------DKNGIYLAEETYGEITL----KLESQNRELNEKMLLLKALKDELQNKEKI 436
            |.|..|.|       |:..|   .....|:.|    :.:::..:|.|:  |:.|..:::..:.::
  Rat   381 KIDQQAGRGQARGKLDRGDI---RHIQAEVQLHSGQEEQAEMGQLREQ--LISAFHEQMDVRRRL 440

  Fly   437 FSEVSMSLVEKTQELK-KTEENLLNTKGTLLLTKKVLTKTKRRYKEKKELVAS--HMKTEQVLTT 498
                 :.|..:..|:: .|..:||.                         :||  |.|:.:.|..
  Rat   441 -----LELENQAMEVQIDTSRHLLT-------------------------IASWEHEKSRRALKW 475

  Fly   499 QAQEILAAADLATDDTHQLHGTIERRRELDEKIRRSCDQFKDRMQDNLE-------------MIG 550
            :.                     |||:|...|.....|.......||||             ::|
  Rat   476 RE---------------------ERRKESYTKEDSEKDSDTGDEPDNLEPPEVASARENIAALVG 519

  Fly   551 GSLNLYQDQQAALKEQLSQEMVNSSYVSQRL--ALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGE 613
            ....| :.::.||:::..:.......:.:.|  .:.|.:..|:|..:|                .
  Rat   520 EQKKL-RKEKLALEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLC----------------R 567

  Fly   614 VMKISDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSLQ 678
            |.::..:::         :||...||....::...:.:....| |:::.|.       ||....|
  Rat   568 VHELEVENT---------EMQSHALLRDSALRHRREAVRRLEQ-HRSLCDE-------IIQGQRQ 615

  Fly   679 SVEEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANERALAQQEDALLESMM------------- 730
            .::::..::.:.||:|..:.|.:.|| .:|:.....:|..::   ||.:|.:             
  Rat   616 IIDDYNLEIPRHLEELYEVYLRELEE-GSLERATIMDRVASR---ALQDSSLPKITPAGTTLTPD 676

  Fly   731 MQMEQIKNLRSKNSISMSVHLNKMEESRLTRNHRIDDIKSGIQDYQKLGIEAS------QSAQAE 789
            ..:|.:|.|.|              |::..:|:.:..:.:....|..  .:||      :|:...
  Rat   677 SDLESVKTLSS--------------EAQCPQNNTLPPLGTDSDSYHM--FKASPRAWQVKSSSVP 725

  Fly   790 LTSQMEAGMLCLDQGVANCSMLQVHMKNLNQKYEKETNENVGSVRVHHNQ-VEIICQESKQQLEA 853
            ....::.|.|...:.....|:    ...:|.  ..:::||:..:.:.|.: .||:.:.....::|
  Rat   726 TPPPIQVGSLVTQEAPPQDSL----GSQINS--SPDSSENLSEILLSHKERKEILTRTKCISVKA 784

  Fly   854 VQEKTEVNLEQMVDARQQLITEDRQRFIGHATVATDLVQESNRQFSEHAEHQRQQLQICEQ---E 915
            .|.::           :.|.||.| ..:..||..:.|   |....||..:.:......|::   .
  Rat   785 AQRRS-----------RALGTEGR-HLLAPATERSSL---SLHSLSEADDVRPPGPLACKRPPSP 834

  Fly   916 LVRFQQSELKTYAPTGTTPSKRDFVYPR-----------TLVATSPHQEIVRRYRQELDWSDLDT 969
            .::...||....:.||..|::.  |.||           ....:...:|.:...|::......:.
  Rat   835 TLQHAISEDNLSSSTGEGPARA--VGPRGDGSGPWVRGQKKCLSKKREESLEAKRRKRRSRSFEV 897

  Fly   970 TATIDECSEGEHDVSMHSVQELSETETIMNSTPIEPVDGVTVKR--GCGTTR------------- 1019
            |.                 |.||.::|.:...  .|.:||:.:|  .||...             
  Rat   898 TG-----------------QGLSRSKTHLLGP--RPSEGVSDRRMPACGRPSPGVRHLGKVSLPL 943

  Fly  1020 -------NSNSNALKPPVATGGKRSSSLSRSLTPSKTSPRGSPAF-----VRHN 1061
                   |.|:.:..|.........:.:||..|.....|.||..|     ::||
  Rat   944 AKVKFPPNQNTGSGNPSPLLVPSNQAGVSRRATRGPNLPHGSSTFGKDGRLQHN 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 138/368 (38%)
SMC_prok_B <408..728 CDD:274008 54/337 (16%)
SMC_prok_B <651..>921 CDD:274008 49/292 (17%)
Microtub_bind 923..>1004 CDD:464048 14/91 (15%)
Kif19NP_001402044.1 KISc_KIP3_like 11..346 CDD:276821 132/352 (38%)
Smc <340..>605 CDD:440809 61/347 (18%)

Return to query results.
Submit another query.