DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp61F and klp-18

DIOPT Version :10

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_501093.1 Gene:klp-18 / 177474 WormBaseID:WBGene00002228 Length:932 Species:Caenorhabditis elegans


Alignment Length:964 Identity:255/964 - (26%)
Similarity:441/964 - (45%) Gaps:208/964 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYS 81
            :|.|:.|.||||   ..|....:|.:.|.|  .|||..|.:.  :|::.....|...|.|.||:.
 Worm     2 SQYIKCYGRVRP---SARLGAPSESLFVGG--RVVTIETDNG--SKRYELHHIFDSSSSQEDVFG 59

  Fly    82 VVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDEL- 145
            .|...::|:.:.|||.|||||||||:||||||:|.     ..||.|...:|:|||::.|:|..| 
 Worm    60 TVAKKIVEDCVEGYNGTVFAYGQTGSGKTHTMLGP-----CDSWTDQELMGLIPRSVEHVFQHLD 119

  Fly   146 ----RMMEVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDV 206
                ...::.:::.:.::|||||.:.|||:..:..::|   ||.|  .:.:.|.....|.:..|:
 Worm   120 TKAKECQKLTFSVSVEFVELYNEVIYDLLNAKNKVQLR---DSGK--DIQLVGALSKNVDNPLDL 179

  Fly   207 YKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGK-LNLVDLAGSENVSK 270
            ..|::||.:.|.|.:|.|||:|||||.:  :::.|:.....||.:.:... ||||||||||..:.
 Worm   180 MHLVQKGWQERSTGSTAMNAESSRSHAL--LIIRIKTQERTGELVKERSSILNLVDLAGSERQTH 242

  Fly   271 AGNEKGIRVRETVNINQSLLTLGRVITALVDRAP---HVPYRESKLTRLLQESLGGRTKTSIIAT 332
            . ...|.|::|..|||.||..|||.|..|.|.:.   |||||:|.||.:|:.||||.:||::|..
 Worm   243 T-KSSGDRLKEATNINSSLTVLGRCIRLLADPSKAKGHVPYRDSHLTHILKNSLGGNSKTAVIVN 306

  Fly   333 ISPGHKDIEETLSTLEYAHRA---KNIQNKPEV---NQKLTKKTVLKEYTEEIDKLKRDLMAARD 391
            :.|.....:|:.|||.:|...   .||..:.||   :|:.:.|..::|..:|:|:.:..:   |.
 Worm   307 MHPDRDFAQESNSTLMFAQSCTMIMNIATRNEVMTGDQESSYKKAIQELRQEVDETREKV---RT 368

  Fly   392 KNGIYLAEETYGEITLKLES-----QNRELNEK--MLLLK----ALKDELQNK-EKIFSEVS--- 441
            :....|.|....::.||.|:     :|.:|..|  ..|||    :..:::.|: :||.||.|   
 Worm   369 EFASQLDEAEVEQLRLKTENNSLRLENVDLRAKYDFALLKYTIGSENEQIVNEFKKIISEFSAAN 433

  Fly   442 -------MSLVEKT------------QELKKT--------EENLLNTKGTLLL------TKKVLT 473
                   ::|..:|            |||:|.        :|||   ..|:|:      .::..:
 Worm   434 SSSPFECIALKNQTLQLEIEASEKRYQELQKETSALRNRYQENL---DATILMQTPSAKERRSSS 495

  Fly   474 KTKRR----------------------------------------YKEK-KELVASHMKTEQVL- 496
            :.|||                                        .|:| :|..:..::||::| 
 Worm   496 RPKRRETQYRPSPARMALFAEVETSEDAVLDLQCQNEKLSCELSSLKDKHEEATSKSIETERLLQ 560

  Fly   497 ---------------TTQAQEILA-------AADLATDDTHQLHGTIERRR--ELD----EKIRR 533
                           :.:..|.:|       .|:..|.|...||....|:|  ||:    |...|
 Worm   561 GEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDASRKRIAELELSSKESENR 625

  Fly   534 SCDQFKDRMQDNLEMIGGSLNLYQDQQAALKEQLSQEMVNSSYVS---QRLALNSSKSIEMLKEM 595
            |.::.:::....:.||........|:.|||:|:|:|:.::|:.:.   ..|.|:::    .:|::
 Worm   626 SSEELEEQRLYYVSMIEDLERKASDEYAALREELNQKTLSSNLLQVQVDELQLSNA----TIKKL 686

  Fly   596 CAQSLQDQTNLHNKLIGEVMKISDQHSQAFVAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKA 660
            .| .|..:..|...|...:.|.|         :::.::::|.:|.|.|:.:..:.:|.:.     
 Worm   687 NA-DLSTKAGLIRSLEDSIEKKS---------QMITRLEEQAVLDSSELSSTKRQLEHSR----- 736

  Fly   661 MLDSMQ-EKFATIIDSSLQS-VEEHAKQM----HKKLEQLGAMSLPDAEELQNLQEELANERALA 719
             |:::| .|.:....|::|: :::|.|.:    |||           ..|:|::|..|.|..|..
 Worm   737 -LEAIQWRKISEETTSAMQTQLKDHQKDIDQCRHKK-----------KLEIQSMQLSLDNANARV 789

  Fly   720 QQEDALLESMM--------MQMEQIKN-LRSKNSISMSVHLNKMEESRLTRNHRIDDIKSGIQDY 775
            ::.:|:::.:.        |:|.:|:| .:.|.|:|:....:.:....|..|....::.......
 Worm   790 KESEAMMKKLQNDEKQKFDMKMSEIENTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRV 854

  Fly   776 QKLGIEASQSAQAELTSQMEAGMLCLDQGVANCSMLQVHMKNLNQKYEKETNEN 829
            ....||:.||..::.|..:.||:......|.....|:|..|.|.:...:..:||
 Worm   855 LSETIESLQSQHSQDTEVINAGLRTRGDRVGYVDKLRVEKKALEETISQLRSEN 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 134/362 (37%)
SMC_prok_B <408..728 CDD:274008 89/446 (20%)
SMC_prok_B <651..>921 CDD:274008 41/194 (21%)
Microtub_bind 923..>1004 CDD:464048
klp-18NP_501093.1 KISc 5..328 CDD:276812 129/342 (38%)
SMC_prok_B <448..>716 CDD:274008 51/284 (18%)
SMC_N 543..>917 CDD:481474 83/397 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.