DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp61F and osm-3

DIOPT Version :9

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_001367796.1 Gene:osm-3 / 177141 WormBaseID:WBGene00003884 Length:699 Species:Caenorhabditis elegans


Alignment Length:679 Identity:224/679 - (32%)
Similarity:336/679 - (49%) Gaps:106/679 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYSV 82
            ::::|.||.||.|.||:.:.:...|.:......|..:..|. ..|.||||.::..:|....:|:.
 Worm     3 ESVRVAVRCRPFNQREKDLNTTLCVGMTPNVGQVNLNAPDG-AAKDFTFDGAYFMDSTGEQIYND 66

  Fly    83 VVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRM 147
            :|.||:|.|:.|||.|||||||||:|||.:|.|.||...:.        |:||||..|:|.....
 Worm    67 IVFPLVENVIEGYNGTVFAYGQTGSGKTFSMQGIETIPAQR--------GVIPRAFDHIFTATAT 123

  Fly   148 ME-VEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLE 211
            .| |::.:..||||:||||:.|||..|:..|:.|.:...:  .|.:.||.....|......:|:.
 Worm   124 TENVKFLVHCSYLEIYNEEVRDLLGADNKQKLEIKEQPDR--GVYVAGLSMHVCHDVPACKELMT 186

  Fly   212 KGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKG 276
            :|...|....||||..|||||::|::.|    .|:.....:::||||||||||||..||.| ..|
 Worm   187 RGFNNRHVGATLMNKDSSRSHSIFTVYV----EGMTETGSIRMGKLNLVDLAGSERQSKTG-ATG 246

  Fly   277 IRVRETVNINQSLLTLGRVITALVD-RAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDI 340
            .|::|...||.||..||.||:|||| ::.|:|||:||||||||:||||.|||.:||.:||...:.
 Worm   247 DRLKEATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTIMIACVSPSSDNY 311

  Fly   341 EETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMAARDKNGIYL-AEETYGE 404
            :||||||.||:|||||:|||.:|:. .|..:|:||.|||.:||.  |......|:.. |::.:  
 Worm   312 DETLSTLRYANRAKNIKNKPTINED-PKDALLREYQEEIARLKS--MVQPGAVGVGAPAQDAF-- 371

  Fly   405 ITLKLESQNRELNEKM-LLLKALKDELQNKEKIFSEVSMSLVEKTQELKKTEENL--LNTKGTLL 466
               .:|.:.::|.|:. ..:..|:.|.:.::...:|:...|.....:.::...||  ||.:..  
 Worm   372 ---SIEEERKKLREEFEEAMNDLRGEYEREQTSKAELQKDLESLRADYERANANLDNLNPEEA-- 431

  Fly   467 LTKKV------------LTKTKRRYKEKKELVASHMKTEQVL----------------TTQAQEI 503
             .||:            ...|:.:.|..|:|..:..||:::.                |||.:..
 Worm   432 -AKKIQQLQDQFIGGEEAGNTQLKQKRMKQLKEAETKTQKLAAALNVHKDDPLLQVYSTTQEKLD 495

  Fly   504 LAAADLATD---------DTHQLHGTIERRRELD--EKIRRSCDQFK------DRMQ-------- 543
            ...:.|..:         :...|||..|..| ||  :.||:...|.|      |::|        
 Worm   496 AVTSQLEKEVKKSKGYEREIEDLHGEFELDR-LDYLDTIRKQDQQLKLLMQIMDKIQPIIKKDTN 559

  Fly   544 -DNLEMIGGSLNLYQDQQAALKEQLSQE-----MVNSSYVS----QRLALNSSKSIEMLKEMCAQ 598
             .|::.|.......:|:...:..::|..     :.|:.|:.    |...|..|...:.|:|..|:
 Worm   560 YSNVDRIKKEAVWNEDESRWILPEMSMSRTILPLANNGYMQEPARQENTLLRSNFDDKLRERLAK 624

  Fly   599 SLQDQTNLHNKLIGEVMKI-------SDQ 620
            |  |..||.|.....|.:|       |||
 Worm   625 S--DSENLANSYFKPVKQINVINKYKSDQ 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 154/348 (44%)
Kinesin 25..356 CDD:278646 146/332 (44%)
Microtub_bind 923..>1009 CDD:290642
osm-3NP_001367796.1 Motor_domain 3..327 CDD:419868 148/339 (44%)
SMC_prok_B <342..559 CDD:274008 47/227 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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