DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp61F and Kif1b

DIOPT Version :10

Sequence 1:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_038965095.1 Gene:Kif1b / 117548 RGDID:621520 Length:1825 Species:Rattus norvegicus


Alignment Length:1043 Identity:251/1043 - (24%)
Similarity:443/1043 - (42%) Gaps:244/1043 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SNQNIQVYVRVRPLNSRE-----RCI-----RSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSF 70
            |..:::|.|||||.||||     :||     .|..:::...|:|.          .|.|:||.|:
  Rat     2 SGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKEA----------PKSFSFDYSY 56

  Fly    71 ----GPE----SKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWED 127
                .||    :.|..||:.:...::.....|||..:|||||||.||::||:|.         ::
  Rat    57 WSHTSPEDPCFASQSRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGK---------QE 112

  Fly   128 DSDIGIIPRALSHLFDELR---MMEVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGS 189
            :|..||||:....||:::.   ..::.|::.:||:|:|.|.:.|||:..:...:|:.:....  .
  Rat   113 ESQAGIIPQLCEELFEKINDNCNEDMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLL--G 175

  Fly   190 VIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIR----ENGIEGED 250
            ..::.|.::.|.|..|:..|::.|.:.|..|.|.||..|||||.||:||...:    |..:..| 
  Rat   176 PYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTE- 239

  Fly   251 MLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD------------RA 303
              |:.|::||||||||.....| .||.|::|..|||:||.|||:||:||.:            :.
  Rat   240 --KVSKISLVDLAGSERADSTG-AKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKT 301

  Fly   304 PHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTK 368
            ..:|||:|.||.||:|:|||.::|:::|.:||...:.:||||||.||.|||.|:....:|:....
  Rat   302 DFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINEDPNA 366

  Fly   369 KTVLKEYTEEIDKLKRDLMAARDKNGIY----LAEETYGEITLKLESQNRELNEKMLLLKALKDE 429
            |.| :|..||:.:|| ||:.|:....|.    |.::..|...                 |.|||.
  Rat   367 KLV-RELKEEVTRLK-DLLRAQGLGDIIDIDPLMDDYSGSGG-----------------KYLKDF 412

  Fly   430 LQNKEKI-----------FSEVSMSLVEKT------------QELKKTEENLLNTKG------TL 465
            ..||.:.           ||..||..:..:            ..:...:|.:::|.|      .|
  Rat   413 QNNKHRYLLASENQRPGNFSTASMGSLTSSPSSCSLNSQAGLTSVTSIQERIMSTPGGEEAIERL 477

  Fly   466 LLTKKVLTKTKRRYKEKKELVASHMKTEQVLTTQAQEILAAADLATDDTHQLHGTIERRRE---- 526
            ..::|::.:....::||       ::..:.:..:.:.:||...:|..:.....|....::.    
  Rat   478 KESEKIIAELNETWEEK-------LRKTEAIRMEREALLAEMGVAIREDGGTLGVFSPKKTPHLV 535

  Fly   527 ---------------LDEKIRRSCDQFKDRMQDNLEMIGGSLN----LYQDQQAALKE------- 565
                           :.:.|.|......:|.|| :.:.|..:.    :::.::....|       
  Rat   536 NLNEDPLMSECLLYYIKDGITRVGQADAERRQD-IVLSGAHIKEEHCIFRSERNNTGEVIVTLEP 599

  Fly   566 -QLSQEMVNSSYVSQRLALNSSKSIEMLKEMCAQ-SLQDQTNLHNKLIGEVMKISDQHSQAFVAK 628
             :.|:..||...|:..:.|.|...|.|.|....: :..:|.....:........|:.....|..:
  Rat   600 CERSETYVNGKRVAHPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQR 664

  Fly   629 LMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSLQSVEEHAKQMHKKLEQ 693
              |.:::|.:.|.:|::..||.:|...:|.|...|.:.|:.....:|.||:::   ||:..:  .
  Rat   665 --ELLEKQGIDMKQEMEKRLQEMEILYKREKEEADLLLEQQRLDYESKLQALQ---KQVETR--S 722

  Fly   694 LGAMSLPDAEELQNLQEEL---ANERALAQQEDALLESMMMQMEQIKNLRSKNSI------SMSV 749
            |.|.:..:.||    :||:   .:|..|||.  |..:....|...:::|...|::      ::||
  Rat   723 LAAETTEEEEE----EEEVPWTQHEFELAQW--AFRKWKSHQFTSLRDLLWGNAVYLKEANAISV 781

  Fly   750 HLNKMEE--------------------SRLTRNH------------RIDDIKSGIQDYQKLGIEA 782
            .|.|..:                    :.:.:.|            .:.|:|:|...|..|.   
  Rat   782 ELKKKVQFQFVLLTDTLYSPVPPELLPTEMGKTHEDRPFPRTVVAVEVQDLKNGATHYWSLD--- 843

  Fly   783 SQSAQAELTSQM-----EAGMLCLDQGVANCSMLQVHMKNLNQKYEK-ETNENVGSVRVHHNQVE 841
            ....:.:|..:|     |.|....|..       :..|...:..|:: ...:.|||..:.|..|.
  Rat   844 KLKQRLDLMREMYDRAGEVGSNAQDDS-------ETTMTGSDPFYDRFHWFKLVGSSPIFHGCVN 901

  Fly   842 IICQESKQQLEAVQEKT--------EVNLEQMVDARQQLITE-DRQRFIGHATVATDLVQESNRQ 897
                      |.:.::|        :.::.::.|.:|..:.: |.:.|:.. |.:....:|.:..
  Rat   902 ----------ERLADRTPSPTFSTADSDITELADEQQDAMEDFDDEAFVDD-TGSDAGTEEGSEL 955

  Fly   898 FSE 900
            ||:
  Rat   956 FSD 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 135/384 (35%)
SMC_prok_B <408..728 CDD:274008 67/383 (17%)
SMC_prok_B <651..>921 CDD:274008 56/306 (18%)
Microtub_bind 923..>1004 CDD:464048
Kif1bXP_038965095.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 134/381 (35%)
Kinesin_assoc 358..555 CDD:465047 35/222 (16%)
FHA_KIF1B 530..639 CDD:438779 16/109 (15%)
GimC 662..>719 CDD:440992 16/61 (26%)
KIF1B 845..892 CDD:463574 8/53 (15%)
KIF1B <956..975 CDD:463574 2/3 (67%)
DUF3694 1266..1422 CDD:463599
PH_KIFIA_KIFIB 1710..1808 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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